Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq5 158 5e-33 seq9 152 2e-31 seq1 149 2e-30 seq4 113 2e-19 >seq5 Length=2157754 Score = 158 bits (174), Expect = 5e-33 Identities = 256/368 (70%), Gaps = 3/368 (1%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||| |||| ||||||||||| || ||| |||| || || ||||| || || || || | Sbjct 2156045 TTTACTCCCGAAGAAATTTCTTCCATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGA 2155986 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 || |||| | || | || || || ||||||||||||||||| ||||||||| | Sbjct 2155985 TACCTTGGAACCAAGGTGAACGACGCTGTCATTACTGTTCCCGCTTACTTCAATGATTCT 2155926 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || ||||| || || || || || || | ||||||||| | || || | |||| ||| Sbjct 2155925 CAGCGGCAGGCTACCAAGGACGCTGGTCTGATTGCTGGTCTGAACGTCCAGAGAATCATT 2155866 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477 || || ||||| || || || | || || || || | || || ||||| | || Sbjct 2155865 AACGAGCCTACCGCCGCCGCCATTGCCTACGGCCTTGACAA---GAAGGAAACTGGCGAG 2155809 Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537 ||| | | | || ||| | || ||||||||| ||| ||| | || || || Sbjct 2155808 CGAAACGTGCTCATCTTCGATCTCGGAGGAGGAACTTTCGATGTCTCTCTTCTCTCCATC 2155749 Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 |||||||| | ||||| || ||||||||| ||||| |||||||| || ||||| || Sbjct 2155748 GAAGATGGTATTTTTGAGGTCAAGGCAACCGCCGGTGACACTCATCTCGGTGGTGAGGAC 2155689 Query 451598 ATTGATAA 451605 |||| || Sbjct 2155688 TTTGACAA 2155681 >seq9 Length=908501 Score = 152 bits (168), Expect = 2e-31 Identities = 282/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | || | || | | ||| ||||| || || || |||| |||||| Sbjct 30183 GGAAAGCCCAACATCGAGGTCGAGTTTAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAA 30242 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| |||| || || ||||| || || || || ||| |||| || Sbjct 30243 ATCTCCTCCATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACTAAG 30302 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | || || || ||||| ||||||||||| ||||||||| | || || || || || Sbjct 30303 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACC 30362 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || | |||||||||| | || |||| |||| || || || ||||| || Sbjct 30363 AAGGACGCTGGTCTTATTGCTGGTCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCC 30422 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || || || || | || || || || | || ||| | | | Sbjct 30423 GCCGCCATTGCCTACGGTCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 30479 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| |||| ||||||||| |||| ||| | || || ||||| ||||| | ||| Sbjct 30480 TTCGATCTTGGAGGAGGAACTTTTGATGTCTCTCTTCTGTCTATTGAGGATGGCATCTTT 30539 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| ||| || || ||||| || ||||| || |||| || Sbjct 30540 GAGGTCAAGGCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAA 30592 >seq1 Length=3339266 Score = 149 bits (164), Expect = 2e-30 Identities = 281/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | || | || | | ||| || || || || ||| |||| |||||| Sbjct 3323425 GGAAAGCCCAACATCGAGGTCGAGTTTAAGGGCGAGACCAAGGTCTTTACTCCCGAAGAA 3323366 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| |||| || || ||||| || || || || ||| |||| | Sbjct 3323365 ATCTCCTCTATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACCAAG 3323306 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | || || || ||||| ||||||||||| ||||||||| | || || || || || Sbjct 3323305 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACC 3323246 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || | |||||||||| | || || | |||| ||||| || ||||| || Sbjct 3323245 AAGGACGCTGGTCTTATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCC 3323186 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || || || || | || || || || | || ||| | | | Sbjct 3323185 GCCGCCATTGCCTACGGCCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 3323129 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| |||| ||||||||| ||| ||| | || || ||||| ||||| | ||| Sbjct 3323128 TTCGATCTTGGAGGAGGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTT 3323069 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| ||| || || ||||| || ||||| || |||| || Sbjct 3323068 GAGGTCAAGGCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAA 3323016 Score = 91.5 bits (100), Expect = 6e-13 Identities = 181/267 (68%), Gaps = 6/267 (2%) Strand=Plus/Plus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| ||||| || ||||| ||||| || || || || || || ||||| || ||| Sbjct 1140164 ACTGTCCCCGCCTACTTCAACGATGCCCAGCGACAGGCCACCAAGGATGCCGGTATCATT 1140223 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||| | || ||||| |||||| |||| || || || || || || | || || || Sbjct 1140224 GCTGGTCTGAACGTTCTGCGAATTGTTAACGAGCCCACTGCCGCCGCCATTGCCTACGGT 1140283 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 || | | || | | || || || | ||| | || | ||| ||||||||||| Sbjct 1140284 CTGG----ACCACACCGAT--GACGAGAAGCAGATTGTTGTCTACGATCTTGGTGGAGGA 1140337 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 || ||| ||| | || || ||||| ||| || ||||| || || ||| | Sbjct 1140338 ACCTTCGATGTTTCCCTCCTGTCCATTGAGTCTGGTGTCTTTGAGGTTCTTGCCACCGCT 1140397 Query 451571 GGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| || ||||| || ||||| ||| Sbjct 1140398 GGTGACACCCATCTTGGTGGTGAGGAT 1140424 >seq4 Length=2565013 Score = 113 bits (124), Expect = 2e-19 Identities = 201/293 (69%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || |||||||| || || ||||| || || || ||||| ||| | || || || || || Sbjct 1799455 GTCACTGATGCCGTCATCACTGTCCCTGCCTACTTCAACGATTCTCAGCGACAGGCCACC 1799396 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||| | || || | ||||| || || || ||||| || Sbjct 1799395 AAGGATGCCGGTCTCATTGCCGGTCTGAACGTCCAGCGAATCATCAACGAGCCTACCGCC 1799336 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || || | || || || | | || ||| || | | Sbjct 1799335 GCTGCCATTGCCTACGGTCTTGACAAG---AAGGAGGCTGGTGAGCGAAACGTTCTCATC 1799279 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| ||||||||||||| ||| |||| | || || ||||| || || | || Sbjct 1799278 TTCGATCTTGGTGGAGGAACCTTCGATGTTTCTCTGCTGTCCATTGAGGACGGTATCTTC 1799219 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| |||||| || ||||| || ||||| ||| | ||||| Sbjct 1799218 GAGGTCAAGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGATAA 1799166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717362130428