Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq5 158 5e-33
seq9 152 2e-31
seq1 149 2e-30
seq4 113 2e-19
>seq5
Length=2157754
Score = 158 bits (174), Expect = 5e-33
Identities = 256/368 (70%), Gaps = 3/368 (1%)
Strand=Plus/Minus
Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297
||| |||| ||||||||||| || ||| |||| || || ||||| || || || || |
Sbjct 2156045 TTTACTCCCGAAGAAATTTCTTCCATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGA 2155986
Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357
|| |||| | || | || || || ||||||||||||||||| ||||||||| |
Sbjct 2155985 TACCTTGGAACCAAGGTGAACGACGCTGTCATTACTGTTCCCGCTTACTTCAATGATTCT 2155926
Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417
|| ||||| || || || || || || | ||||||||| | || || | |||| |||
Sbjct 2155925 CAGCGGCAGGCTACCAAGGACGCTGGTCTGATTGCTGGTCTGAACGTCCAGAGAATCATT 2155866
Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477
|| || ||||| || || || | || || || || | || || ||||| | ||
Sbjct 2155865 AACGAGCCTACCGCCGCCGCCATTGCCTACGGCCTTGACAA---GAAGGAAACTGGCGAG 2155809
Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537
||| | | | || ||| | || ||||||||| ||| ||| | || || ||
Sbjct 2155808 CGAAACGTGCTCATCTTCGATCTCGGAGGAGGAACTTTCGATGTCTCTCTTCTCTCCATC 2155749
Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597
|||||||| | ||||| || ||||||||| ||||| |||||||| || ||||| ||
Sbjct 2155748 GAAGATGGTATTTTTGAGGTCAAGGCAACCGCCGGTGACACTCATCTCGGTGGTGAGGAC 2155689
Query 451598 ATTGATAA 451605
|||| ||
Sbjct 2155688 TTTGACAA 2155681
>seq9
Length=908501
Score = 152 bits (168), Expect = 2e-31
Identities = 282/413 (68%), Gaps = 3/413 (1%)
Strand=Plus/Plus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
||||||||| | || | || | | ||| ||||| || || || |||| ||||||
Sbjct 30183 GGAAAGCCCAACATCGAGGTCGAGTTTAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAA 30242
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || ||| |||| || || ||||| || || || || ||| |||| ||
Sbjct 30243 ATCTCCTCCATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACTAAG 30302
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | || || || ||||| ||||||||||| ||||||||| | || || || || ||
Sbjct 30303 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACC 30362
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| || || || | |||||||||| | || |||| |||| || || || ||||| ||
Sbjct 30363 AAGGACGCTGGTCTTATTGCTGGTCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCC 30422
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
|| || | || || || || | || || || || | || ||| | | |
Sbjct 30423 GCCGCCATTGCCTACGGTCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 30479
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| ||| |||| ||||||||| |||| ||| | || || ||||| ||||| | |||
Sbjct 30480 TTCGATCTTGGAGGAGGAACTTTTGATGTCTCTCTTCTGTCTATTGAGGATGGCATCTTT 30539
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| ||| ||| || || ||||| || ||||| || |||| ||
Sbjct 30540 GAGGTCAAGGCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAA 30592
>seq1
Length=3339266
Score = 149 bits (164), Expect = 2e-30
Identities = 281/413 (68%), Gaps = 3/413 (1%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
||||||||| | || | || | | ||| || || || || ||| |||| ||||||
Sbjct 3323425 GGAAAGCCCAACATCGAGGTCGAGTTTAAGGGCGAGACCAAGGTCTTTACTCCCGAAGAA 3323366
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || |||||| |||| || || ||||| || || || || ||| |||| |
Sbjct 3323365 ATCTCCTCTATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACCAAG 3323306
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | || || || ||||| ||||||||||| ||||||||| | || || || || ||
Sbjct 3323305 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACC 3323246
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| || || || | |||||||||| | || || | |||| ||||| || ||||| ||
Sbjct 3323245 AAGGACGCTGGTCTTATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCC 3323186
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
|| || | || || || || | || || || || | || ||| | | |
Sbjct 3323185 GCCGCCATTGCCTACGGCCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 3323129
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| ||| |||| ||||||||| ||| ||| | || || ||||| ||||| | |||
Sbjct 3323128 TTCGATCTTGGAGGAGGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTT 3323069
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| ||| ||| || || ||||| || ||||| || |||| ||
Sbjct 3323068 GAGGTCAAGGCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAA 3323016
Score = 91.5 bits (100), Expect = 6e-13
Identities = 181/267 (68%), Gaps = 6/267 (2%)
Strand=Plus/Plus
Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390
||||| ||||| || ||||| ||||| || || || || || || ||||| || |||
Sbjct 1140164 ACTGTCCCCGCCTACTTCAACGATGCCCAGCGACAGGCCACCAAGGATGCCGGTATCATT 1140223
Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450
|||||| | || ||||| |||||| |||| || || || || || || | || || ||
Sbjct 1140224 GCTGGTCTGAACGTTCTGCGAATTGTTAACGAGCCCACTGCCGCCGCCATTGCCTACGGT 1140283
Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510
|| | | || | | || || || | ||| | || | ||| |||||||||||
Sbjct 1140284 CTGG----ACCACACCGAT--GACGAGAAGCAGATTGTTGTCTACGATCTTGGTGGAGGA 1140337
Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570
|| ||| ||| | || || ||||| ||| || ||||| || || ||| |
Sbjct 1140338 ACCTTCGATGTTTCCCTCCTGTCCATTGAGTCTGGTGTCTTTGAGGTTCTTGCCACCGCT 1140397
Query 451571 GGTGATACTCATCTAGGAGGTGAAGAT 451597
||||| || ||||| || ||||| |||
Sbjct 1140398 GGTGACACCCATCTTGGTGGTGAGGAT 1140424
>seq4
Length=2565013
Score = 113 bits (124), Expect = 2e-19
Identities = 201/293 (69%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| |||||||| || || ||||| || || || ||||| ||| | || || || || ||
Sbjct 1799455 GTCACTGATGCCGTCATCACTGTCCCTGCCTACTTCAACGATTCTCAGCGACAGGCCACC 1799396
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || | ||||| ||| | || || | ||||| || || || ||||| ||
Sbjct 1799395 AAGGATGCCGGTCTCATTGCCGGTCTGAACGTCCAGCGAATCATCAACGAGCCTACCGCC 1799336
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
||||| | || || || || | || || || | | || ||| || | |
Sbjct 1799335 GCTGCCATTGCCTACGGTCTTGACAAG---AAGGAGGCTGGTGAGCGAAACGTTCTCATC 1799279
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| ||| ||||||||||||| ||| |||| | || || ||||| || || | ||
Sbjct 1799278 TTCGATCTTGGTGGAGGAACCTTCGATGTTTCTCTGCTGTCCATTGAGGACGGTATCTTC 1799219
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| ||| |||||| || ||||| || ||||| ||| | |||||
Sbjct 1799218 GAGGTCAAGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGATAA 1799166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975717362130428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |