Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq4 246 4e-60
seq3 141 1e-28
>seq4
Length=2565013
Score = 246 bits (272), Expect = 4e-60
Identities = 1145/1790 (64%), Gaps = 63/1790 (4%)
Strand=Plus/Minus
Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTC 105617
||||||| || ||| || ||| | | ||| || |||||||| ||||||||||| |
Sbjct 2495637 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGAC 2495578
Query 105618 CTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 105677
| | ||||| |||| | ||||| |||| ||||||| ||| || || | |||
Sbjct 2495577 CCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTGCCCATGGTGGGGTCCTTGATGT 2495518
Query 105678 AAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735
| || | ||| |||| ||||||||||| | || | || ||||| || ||
Sbjct 2495517 GGATGTTGAGGGACTGGGACT--GGTCAATGAAGGGGGATCGGTCGGCAGCCATCTCGAT 2495460
Query 105736 GACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGAT 105795
|| |||| || |||||||| || ||| || | |||||| || | |||||
Sbjct 2495459 GATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGAT 2495400
Query 105796 ATCTGAGATATTTTGAATTGAACCCC---CCGCCTTGACCATGAGATCCTTCATATCCTT 105852
| | ||| || || | || || | ||| || || | | |||||| ||
Sbjct 2495399 GTTGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTCATGGTCTC 2495343
Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTC 105912
| ||| ||||||| || || || |||| || |||||||||| |||||
Sbjct 2495342 GTTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTC 2495283
Query 105913 TCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTAT 105971
|| || || || || ||| || ||||| | |||||||| || ||||| || ||
Sbjct 2495282 ACCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGA 2495224
Query 105972 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031
|| | || || | ||||| || || ||||| || |||| || || ||| || |
Sbjct 2495223 AGCCGAGAATCTGAGAAGTGGAAGCGGTAGGCATGGGGGCCACCAGCAGCGAGTTTCGCA 2495164
Query 106032 GACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTT---- 106087
|| | | | |||| |||||||| | ||||| || || |||| ||
Sbjct 2495163 TTCCGGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCAG---AGCTCGGAGGGAG 2495107
Query 106088 TCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTC 106147
|||| |||| ||| ||||| || || | || | ||| | ||||| |||| || |||
Sbjct 2495106 TCACGTTCC-ACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGAGAGCCCTGGAAGGTC 2495048
Query 106148 TCATAGGAACCTTGGGCTTCA---GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATAC 106204
|| || | ||| | | ||| |||| || | ||||| | || |||| ||
Sbjct 2495047 TCGTAAGCACCGT---CCTCAAGGGCCATCTCGTAAGAAGCCTCAACGGCACCGTGGTAG 2494991
Query 106205 ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG-CG 106263
||||| || ||||| | || | || |||||| || || || || || | | || ||
Sbjct 2494990 ATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCGAAGG-GCAGTCG 2494932
Query 106264 GCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCAT 106323
| || || ||| || ||||| || ||||||| | |||| |||| |||||||||
Sbjct 2494931 GAGGGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGGTCGGTGTCGCAT 2494872
Query 106324 ATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAG 106380
|| ||||| || |||| || || || | |||| |||||||| ||| ||
Sbjct 2494871 GTTGGACTTCTTGGC---CTCAGGGACAGGGTAGTAGTTTCGGTCAATGATGGCGTTGAG 2494815
Query 106381 ATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA---AAAGTGCGAGT 106437
||| || | ||| | || || || || || | | || || | | ||
Sbjct 2494814 GTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTGGT 2494755
Query 106438 CTCTTC---ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTC 106494
||| || | ||||| | | || || ||||| || |||| ||||| ||||| |||
Sbjct 2494754 CTCGTCTCGAGTGACAAAGGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTC 2494695
Query 106495 ATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAA 106554
||| | | |||||| | ||| || ||||| ||||||| ||| || || ||||
Sbjct 2494694 ATCAGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTACCCAG 2494635
Query 106555 ATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGT 106614
||||| ||||| |||| |||||| || ||||||||||||||| |||| | || |
Sbjct 2494634 GTTCTTCTGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGA 2494575
Query 106615 CTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGG--CGTT 106671
||| ||||| | | ||||| | ||||| | || | ||| || |||| |||
Sbjct 2494574 CTCGGTCTGGCAGTCCAGAATGTGGTACCACAGCTTCTG-GGCAGG---GATGGTTCGTC 2494519
Query 106672 GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCCTCACCCACCGCG 106729
| || || |||||| |||||||| ||| || |||| ||||| ||||| ||
Sbjct 2494518 GACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCACCGTAGACG 2494460
Query 106730 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACC 106789
|| ||| || || || || || || | |||| ||| | | || ||| ||
Sbjct 2494459 TCATCGAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGACT 2494400
Query 106790 CGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCT 106849
|||| |||||| ||||| |||||||| || | || ||||||| ||| |||
Sbjct 2494399 CGCTCCATGAACAGGTCGGGAATCCAGAGAGCCAGGAACAGATCTCGGGCTCGAATCTCC 2494340
Query 106850 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909
|| | ||| ||||| ||| | ||| |||||| | || || ||||||| |||||
Sbjct 2494339 TCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCC 2494280
Query 106910 AGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGC 106962
|| || | || | | ||| ||| | | | ||| || | || || || ||
Sbjct 2494279 AGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCC----TGGTCGACGTATCGAGC 2494224
Query 106963 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCG 107022
||| ||| | || || ||||| || | ||||| | || ||| || || ||
Sbjct 2494223 GGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGC 2494164
Query 107023 AATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 107082
||| ||| |||||| | | |||||| || || ||||| ||||| ||||
Sbjct 2494163 AATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGACAGACCGATACCTCCAGCGGACTT 2494104
Query 107083 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142
||||| | ||||| | | || || | ||||| |||| ||| ||||| ||||| |
Sbjct 2494103 GGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCAT 2494044
Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202
| || |||||| || |||||||| || || || || || ||| | ||||| ||
Sbjct 2494043 GTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGG 2493984
Query 107203 TGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAA 107261
| ||||| |||| ||| ||| ||||| | || ||| ||||| | | | |||
Sbjct 2493983 GGAAGCGTGGGTGAA-GTACTTTTGAGACATGTAGTTGTAGGTCTCAATGGCTCGGGCAA 2493925
Query 107262 TGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311
||| || |||||||| |||| | ||| ||||| | ||| | ||||||
Sbjct 2493924 TGTTGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCTGGGGT 2493875
>seq3
Length=2716294
Score = 141 bits (156), Expect = 1e-28
Identities = 348/520 (67%), Gaps = 16/520 (3%)
Strand=Plus/Plus
Query 116995 ACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 117054
|| |||||||| |||||||||||||| || | || ||||| ||||| ||||| ||
Sbjct 856605 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 856664
Query 117055 GGATTCTTCGCGTTCCAAA---TGG-GTGGC--ACCCCAACTTGTTTGAGGAGACGATCC 117108
|| || | | ||| | | ||| || || | |||| || ||||| ||
Sbjct 856665 GGGTTGGTGGAGTTGTAGACCTTGGAGTTGCCGAGAGCAACC------AGCAGACGGTCG 856718
Query 117109 GACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGG 117168
| ||| |||||||||||| | |||| || | |||||| |||| ||| ||| ||
Sbjct 856719 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGACCACAGGGC 856778
Query 117169 AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATA 117228
|| ||||| | |||| | | ||| || |||| ||||| | | | | | || |
Sbjct 856779 AGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGTCCTCGACA 856838
Query 117229 GTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAACTCCTGGTG 117287
| | | | ||||| || | | | || | ||||||| |||||| || |||
Sbjct 856839 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTGTG 856897
Query 117288 GAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCG 117347
|||||||| |||||||| || || || || |||||| ||||| ||||||||||| ||
Sbjct 856898 CAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 856957
Query 117348 CTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGC 117407
|||||| | ||| | || | | ||| || |||||||||||||| ||||| || ||
Sbjct 856958 CTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGC 857017
Query 117408 AAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCC 117466
||| || | || |||||| | |||| ||| | | || | | ||| || | ||||
Sbjct 857018 AAAAGCTATCAGCCGCTCGCCAAAGG-TCGACTCGTCGTCGGAGATCCACTTGAGCGCCC 857076
Query 117467 ATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506
| | |||||||||| || || || | || | ||||||
Sbjct 857077 AGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980497634840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |