Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 246 4e-60 seq3 141 1e-28 >seq4 Length=2565013 Score = 246 bits (272), Expect = 4e-60 Identities = 1145/1790 (64%), Gaps = 63/1790 (4%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTC 105617 ||||||| || ||| || ||| | | ||| || |||||||| ||||||||||| | Sbjct 2495637 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGAC 2495578 Query 105618 CTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 105677 | | ||||| |||| | ||||| |||| ||||||| ||| || || | ||| Sbjct 2495577 CCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTGCCCATGGTGGGGTCCTTGATGT 2495518 Query 105678 AAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735 | || | ||| |||| ||||||||||| | || | || ||||| || || Sbjct 2495517 GGATGTTGAGGGACTGGGACT--GGTCAATGAAGGGGGATCGGTCGGCAGCCATCTCGAT 2495460 Query 105736 GACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGAT 105795 || |||| || |||||||| || ||| || | |||||| || | ||||| Sbjct 2495459 GATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGAT 2495400 Query 105796 ATCTGAGATATTTTGAATTGAACCCC---CCGCCTTGACCATGAGATCCTTCATATCCTT 105852 | | ||| || || | || || | ||| || || | | |||||| || Sbjct 2495399 GTTGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTCATGGTCTC 2495343 Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTC 105912 | ||| ||||||| || || || |||| || |||||||||| ||||| Sbjct 2495342 GTTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTC 2495283 Query 105913 TCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTAT 105971 || || || || || ||| || ||||| | |||||||| || ||||| || || Sbjct 2495282 ACCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGA 2495224 Query 105972 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031 || | || || | ||||| || || ||||| || |||| || || ||| || | Sbjct 2495223 AGCCGAGAATCTGAGAAGTGGAAGCGGTAGGCATGGGGGCCACCAGCAGCGAGTTTCGCA 2495164 Query 106032 GACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTT---- 106087 || | | | |||| |||||||| | ||||| || || |||| || Sbjct 2495163 TTCCGGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCAG---AGCTCGGAGGGAG 2495107 Query 106088 TCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTC 106147 |||| |||| ||| ||||| || || | || | ||| | ||||| |||| || ||| Sbjct 2495106 TCACGTTCC-ACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGAGAGCCCTGGAAGGTC 2495048 Query 106148 TCATAGGAACCTTGGGCTTCA---GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATAC 106204 || || | ||| | | ||| |||| || | ||||| | || |||| || Sbjct 2495047 TCGTAAGCACCGT---CCTCAAGGGCCATCTCGTAAGAAGCCTCAACGGCACCGTGGTAG 2494991 Query 106205 ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG-CG 106263 ||||| || ||||| | || | || |||||| || || || || || | | || || Sbjct 2494990 ATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCGAAGG-GCAGTCG 2494932 Query 106264 GCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCAT 106323 | || || ||| || ||||| || ||||||| | |||| |||| ||||||||| Sbjct 2494931 GAGGGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGGTCGGTGTCGCAT 2494872 Query 106324 ATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAG 106380 || ||||| || |||| || || || | |||| |||||||| ||| || Sbjct 2494871 GTTGGACTTCTTGGC---CTCAGGGACAGGGTAGTAGTTTCGGTCAATGATGGCGTTGAG 2494815 Query 106381 ATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA---AAAGTGCGAGT 106437 ||| || | ||| | || || || || || | | || || | | || Sbjct 2494814 GTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTGGT 2494755 Query 106438 CTCTTC---ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTC 106494 ||| || | ||||| | | || || ||||| || |||| ||||| ||||| ||| Sbjct 2494754 CTCGTCTCGAGTGACAAAGGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTC 2494695 Query 106495 ATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAA 106554 ||| | | |||||| | ||| || ||||| ||||||| ||| || || |||| Sbjct 2494694 ATCAGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTACCCAG 2494635 Query 106555 ATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGT 106614 ||||| ||||| |||| |||||| || ||||||||||||||| |||| | || | Sbjct 2494634 GTTCTTCTGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGA 2494575 Query 106615 CTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGG--CGTT 106671 ||| ||||| | | ||||| | ||||| | || | ||| || |||| ||| Sbjct 2494574 CTCGGTCTGGCAGTCCAGAATGTGGTACCACAGCTTCTG-GGCAGG---GATGGTTCGTC 2494519 Query 106672 GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCCTCACCCACCGCG 106729 | || || |||||| |||||||| ||| || |||| ||||| ||||| || Sbjct 2494518 GACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCACCGTAGACG 2494460 Query 106730 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACC 106789 || ||| || || || || || || | |||| ||| | | || ||| || Sbjct 2494459 TCATCGAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGACT 2494400 Query 106790 CGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCT 106849 |||| |||||| ||||| |||||||| || | || ||||||| ||| ||| Sbjct 2494399 CGCTCCATGAACAGGTCGGGAATCCAGAGAGCCAGGAACAGATCTCGGGCTCGAATCTCC 2494340 Query 106850 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909 || | ||| ||||| ||| | ||| |||||| | || || ||||||| ||||| Sbjct 2494339 TCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCC 2494280 Query 106910 AGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGC 106962 || || | || | | ||| ||| | | | ||| || | || || || || Sbjct 2494279 AGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCC----TGGTCGACGTATCGAGC 2494224 Query 106963 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCG 107022 ||| ||| | || || ||||| || | ||||| | || ||| || || || Sbjct 2494223 GGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGC 2494164 Query 107023 AATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 107082 ||| ||| |||||| | | |||||| || || ||||| ||||| |||| Sbjct 2494163 AATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGACAGACCGATACCTCCAGCGGACTT 2494104 Query 107083 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142 ||||| | ||||| | | || || | ||||| |||| ||| ||||| ||||| | Sbjct 2494103 GGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCAT 2494044 Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202 | || |||||| || |||||||| || || || || || ||| | ||||| || Sbjct 2494043 GTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGG 2493984 Query 107203 TGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAA 107261 | ||||| |||| ||| ||| ||||| | || ||| ||||| | | | ||| Sbjct 2493983 GGAAGCGTGGGTGAA-GTACTTTTGAGACATGTAGTTGTAGGTCTCAATGGCTCGGGCAA 2493925 Query 107262 TGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311 ||| || |||||||| |||| | ||| ||||| | ||| | |||||| Sbjct 2493924 TGTTGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCTGGGGT 2493875 >seq3 Length=2716294 Score = 141 bits (156), Expect = 1e-28 Identities = 348/520 (67%), Gaps = 16/520 (3%) Strand=Plus/Plus Query 116995 ACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 117054 || |||||||| |||||||||||||| || | || ||||| ||||| ||||| || Sbjct 856605 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 856664 Query 117055 GGATTCTTCGCGTTCCAAA---TGG-GTGGC--ACCCCAACTTGTTTGAGGAGACGATCC 117108 || || | | ||| | | ||| || || | |||| || ||||| || Sbjct 856665 GGGTTGGTGGAGTTGTAGACCTTGGAGTTGCCGAGAGCAACC------AGCAGACGGTCG 856718 Query 117109 GACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGG 117168 | ||| |||||||||||| | |||| || | |||||| |||| ||| ||| || Sbjct 856719 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGACCACAGGGC 856778 Query 117169 AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATA 117228 || ||||| | |||| | | ||| || |||| ||||| | | | | | || | Sbjct 856779 AGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGTCCTCGACA 856838 Query 117229 GTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAACTCCTGGTG 117287 | | | | ||||| || | | | || | ||||||| |||||| || ||| Sbjct 856839 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTGTG 856897 Query 117288 GAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCG 117347 |||||||| |||||||| || || || || |||||| ||||| ||||||||||| || Sbjct 856898 CAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 856957 Query 117348 CTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGC 117407 |||||| | ||| | || | | ||| || |||||||||||||| ||||| || || Sbjct 856958 CTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGC 857017 Query 117408 AAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCC 117466 ||| || | || |||||| | |||| ||| | | || | | ||| || | |||| Sbjct 857018 AAAAGCTATCAGCCGCTCGCCAAAGG-TCGACTCGTCGTCGGAGATCCACTTGAGCGCCC 857076 Query 117467 ATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 | | |||||||||| || || || | || | |||||| Sbjct 857077 AGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980497634840