Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq8 165 2e-35
seq4 165 2e-35
seq11 152 1e-31
>seq8
Length=911341
Score = 165 bits (182), Expect = 2e-35
Identities = 171/224 (76%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| || ||| || || ||||||||||| || || || ||||| || | ||| ||
Sbjct 549466 TCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGT 549525
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || |||||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct 549526 TCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCC 549585
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| || |||||||| ||| ||||| |||||
Sbjct 549586 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 549645
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
||| | ||||| || || | || || || || | |||||||
Sbjct 549646 GGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689
>seq4
Length=2565013
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| || |||||||| ||||||||||| || || || ||||| || | ||||||
Sbjct 110124 TCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGT 110183
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || ||||||||||| || ||||| || ||||| || ||||| || ||||||||
Sbjct 110184 TCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCC 110243
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| ||||||||||| ||| ||||| || ||
Sbjct 110244 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAG 110303
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139
||| | ||||| || || | || || || || | |||||
Sbjct 110304 GGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq11
Length=586936
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| | || || || ||||| ||||| || || || ||||| |||| |||||
Sbjct 305874 TCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 305815
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || |||||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct 305814 TCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACC 305755
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| ||||| || ||||||||| |||||||| || || || || || ||
Sbjct 305754 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAG 305695
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | |||||||| |||| || || || || | |||||
Sbjct 305694 GGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| | |||||||| |||||||| || || || || ||||| |||| || ||
Sbjct 306102 TCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGT 306043
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || || ||||||||||| |||||||||||||| || ||||| || || || ||
Sbjct 306042 TCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACC 305983
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| || || ||||| ||| || || || ||
Sbjct 305982 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAG 305923
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | |||||||| || | || || ||||| | |||||
Sbjct 305922 GGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 136 bits (150), Expect = 9e-27
Identities = 129/165 (78%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| | ||| || ||||| |||||||| || || || ||||| |||| |||||
Sbjct 305086 TCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 305027
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || |||||||||||||| ||||| || ||||| || ||||| || ||||| ||
Sbjct 305026 TCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCC 304967
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
|| ||||| ||||| || ||||||||| || |||||||| ||
Sbjct 304966 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGA 304922
Score = 98.7 bits (108), Expect = 2e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 194977 GTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATG 195036
|||| ||||| || ||||||||||| ||||| || ||||| || ||||| || |||||
Sbjct 305256 GTTCGGCCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATA 305197
Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096
|| || ||||| || || || ||||||||| || || ||||| || || || ||
Sbjct 305196 CCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCG 305137
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | |||||||| || | || || ||||| | |||||
Sbjct 305136 AGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481017175447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |