Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq8 165 2e-35 seq4 165 2e-35 seq11 152 1e-31 >seq8 Length=911341 Score = 165 bits (182), Expect = 2e-35 Identities = 171/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||||| || ||| || || ||||||||||| || || || ||||| || | ||| || Sbjct 549466 TCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGT 549525 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || |||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct 549526 TCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCC 549585 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || ||||||||| || |||||||| ||| ||||| ||||| Sbjct 549586 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 549645 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||| | ||||| || || | || || || || | ||||||| Sbjct 549646 GGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689 >seq4 Length=2565013 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||||| || |||||||| ||||||||||| || || || ||||| || | |||||| Sbjct 110124 TCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGT 110183 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || ||||||||||| || ||||| || ||||| || ||||| || |||||||| Sbjct 110184 TCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCC 110243 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || ||||||||| ||||||||||| ||| ||||| || || Sbjct 110244 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAG 110303 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139 ||| | ||||| || || | || || || || | ||||| Sbjct 110304 GGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344 >seq11 Length=586936 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||||| | || || || ||||| ||||| || || || ||||| |||| ||||| Sbjct 305874 TCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 305815 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || |||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct 305814 TCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACC 305755 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| ||||| || ||||||||| |||||||| || || || || || || Sbjct 305754 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAG 305695 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | |||||||| |||| || || || || | ||||| Sbjct 305694 GGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||||| | |||||||| |||||||| || || || || ||||| |||| || || Sbjct 306102 TCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGT 306043 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || ||||||||||| |||||||||||||| || ||||| || || || || Sbjct 306042 TCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACC 305983 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || ||||||||| || || ||||| ||| || || || || Sbjct 305982 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAG 305923 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | |||||||| || | || || ||||| | ||||| Sbjct 305922 GGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881 Score = 136 bits (150), Expect = 9e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||||| | ||| || ||||| |||||||| || || || ||||| |||| ||||| Sbjct 305086 TCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 305027 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || |||||||||||||| ||||| || ||||| || ||||| || ||||| || Sbjct 305026 TCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCC 304967 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 || ||||| ||||| || ||||||||| || |||||||| || Sbjct 304966 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGA 304922 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 194977 GTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATG 195036 |||| ||||| || ||||||||||| ||||| || ||||| || ||||| || ||||| Sbjct 305256 GTTCGGCCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATA 305197 Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096 || || ||||| || || || ||||||||| || || ||||| || || || || Sbjct 305196 CCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCG 305137 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | |||||||| || | || || ||||| | ||||| Sbjct 305136 AGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481017175447