Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq11 116 2e-21
seq4 95.1 8e-15
seq8 93.3 3e-14
>seq11
Length=586936
Score = 116 bits (128), Expect = 2e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || ||||| | || || ||||| || || || ||
Sbjct 305843 TCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAG 305784
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| |||||| ||||||
Sbjct 305783 ATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 305724
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || |||||| |||| ||| ||||| ||||| || || ||||| |||
Sbjct 305723 TCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACA 305664
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 305663 AAGATCTGCATA 305652
Score = 114 bits (126), Expect = 8e-21
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || ||| ||||| | || || ||||| || ||||| ||
Sbjct 306072 TTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAA 306013
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| ||||| |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 306012 GATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTT 305953
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | ||| | ||| || |||| ||| ||||| ||||| || || ||||||||
Sbjct 305952 GTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCAC 305893
Query 34970 AAAGATCTGCATA 34982
|| |||||||||
Sbjct 305892 GAAAATCTGCATA 305880
Score = 89.7 bits (98), Expect = 3e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 34819 TTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCC 34878
|||| |||| || ||||| || || || || || ||||| |||||||| | || | |
Sbjct 305255 TTCGGCCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATAC 305196
Query 34879 CCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGA 34938
|||||||||| ||||| |||||| | || | || || |||||| ||||
Sbjct 305195 CCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGA 305136
Query 34939 CGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| ||||| ||||| |||||||| || |||||||||
Sbjct 305135 GAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCATA 305092
>seq4
Length=2565013
Score = 95.1 bits (104), Expect = 8e-15
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| ||||| |||| | || || ||||| || ||||| ||
Sbjct 110155 TCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAA 110214
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 110215 ATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 110274
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || |||| ||| ||||| || || || || ||||| |||
Sbjct 110275 TCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACA 110334
Query 34971 AAGATCTGCA 34980
||||| ||||
Sbjct 110335 AAGATTTGCA 110344
>seq8
Length=911341
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/196 (71%), Gaps = 1/196 (1%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| |||||| |||| | || || ||||| || ||||| ||
Sbjct 549497 TCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAG 549556
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 549557 ATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 549616
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || || | ||| || || || || || || ||||| |||
Sbjct 549617 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACA 549676
Query 34971 AAGATCTGCATATTCG 34986
|| |||||||| ||||
Sbjct 549677 AAAATCTGCAT-TTCG 549691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633437784648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |