Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 156 3e-32 >seq1 Length=3339266 Score = 156 bits (172), Expect = 3e-32 Identities = 561/868 (65%), Gaps = 22/868 (3%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| || || ||||||| ||| | || |||||| ||||| || || || Sbjct 3323113 GGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTTGAGGTCAAGGCCACC 3323054 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 3323053 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 3322996 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902 || | || ||||| ||||| |||| || | || || | ||| |||||| || Sbjct 3322995 TTCAGGAGTTTAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTCCG 3322938 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || |||| ||||| || |||| || ||| |||| || ||| | |||| ||| | Sbjct 3322937 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCTGCTCAGACCTC 3322878 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 |||||| | || || | | ||||| ||||||| | || | || | | ||| Sbjct 3322877 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 3322818 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| ||||| || || || |||| || || || | ||| | Sbjct 3322817 ATTCGAGGAGCTCTGTCAGGATCTTTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 3322758 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | || | ||||| || || || || | || ||||| ||||||||||| || || Sbjct 3322757 GAAGGACGCCAAGATGGACAAGGCCTCCGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 3322698 Query 552143 AAGAATTCCTAAAATTCGCGAA----ATGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 |||| ||| || || ||| ||| | | ||| ||||| || || | | Sbjct 3322697 TCGAATCCCT-AAGGTCCAGAAGCTCGTGTCTGACTTC----TTCAACGGCAAGGAGCTG 3322643 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | || || ||||||||||||||||| || || || | || || |||||| Sbjct 3322642 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCCGTCCAGGCTGCTATT 3322583 Query 552258 CTTTCTGGACAAACTGATGAAAAACTA--CAAAATATTGTACTTGTAGATGTTACTCCTC 552315 || ||||| | ||| | ||| || | ||| | || | |||||| |||||| Sbjct 3322582 CTGTCTGGTGACACT--TCTTCCTCTACCCAGGACATTCTGCTCCTTGATGTTGCTCCTC 3322525 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | | Sbjct 3322524 TCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 3322465 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 ||||||| || || ||| || || || || | || || || ||| |||| Sbjct 3322464 CTATTCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 3322405 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 || || | || || || || || || || || || || ||||||| | Sbjct 3322404 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 3322345 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | ||||| |||||||||||||| || || || || ||||| || || |||| Sbjct 3322344 TTGAACTTTCTGGTATCCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 3322285 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 || |||| ||||| || ||| | || || Sbjct 3322284 ATGTCGACGCCAACGGTATTCTCAACGT 3322257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293831735090