Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 3e-32
>seq1
Length=3339266
Score = 156 bits (172), Expect = 3e-32
Identities = 561/868 (65%), Gaps = 22/868 (3%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| || || ||||||| ||| | || |||||| ||||| || || ||
Sbjct 3323113 GGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTTGAGGTCAAGGCCACC 3323054
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 3323053 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 3322996
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || ||||| ||||| |||| || | || || | ||| |||||| ||
Sbjct 3322995 TTCAGGAGTTTAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTCCG 3322938
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| |||| || ||| | |||| ||| |
Sbjct 3322937 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCTGCTCAGACCTC 3322878
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
|||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 3322877 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 3322818
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| ||||| || || || |||| || || || | ||| |
Sbjct 3322817 ATTCGAGGAGCTCTGTCAGGATCTTTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 3322758
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || || | || ||||| ||||||||||| || ||
Sbjct 3322757 GAAGGACGCCAAGATGGACAAGGCCTCCGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 3322698
Query 552143 AAGAATTCCTAAAATTCGCGAA----ATGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
|||| ||| || || ||| ||| | | ||| ||||| || || | |
Sbjct 3322697 TCGAATCCCT-AAGGTCCAGAAGCTCGTGTCTGACTTC----TTCAACGGCAAGGAGCTG 3322643
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | || || ||||||||||||||||| || || || | || || ||||||
Sbjct 3322642 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCCGTCCAGGCTGCTATT 3322583
Query 552258 CTTTCTGGACAAACTGATGAAAAACTA--CAAAATATTGTACTTGTAGATGTTACTCCTC 552315
|| ||||| | ||| | ||| || | ||| | || | |||||| ||||||
Sbjct 3322582 CTGTCTGGTGACACT--TCTTCCTCTACCCAGGACATTCTGCTCCTTGATGTTGCTCCTC 3322525
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | |
Sbjct 3322524 TCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 3322465
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
||||||| || || ||| || || || || | || || || ||| ||||
Sbjct 3322464 CTATTCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 3322405
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
|| || | || || || || || || || || || || ||||||| |
Sbjct 3322404 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 3322345
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | ||||| |||||||||||||| || || || || ||||| || || ||||
Sbjct 3322344 TTGAACTTTCTGGTATCCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 3322285
Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583
|| |||| ||||| || ||| | || ||
Sbjct 3322284 ATGTCGACGCCAACGGTATTCTCAACGT 3322257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029293831735090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |