Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq6 194 1e-44
seq2 86.0 5e-12
>seq6
Length=1972418
Score = 194 bits (214), Expect = 1e-44
Identities = 408/605 (67%), Gaps = 25/605 (4%)
Strand=Plus/Minus
Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858
|||||| | |||||||||||| ||| ||||||||||| |||| ||| || | | |||
Sbjct 1597478 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGAGCGTCGCCCATGGTATGAATGAGCTC 1597419
Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918
||| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 1597418 TCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAAT 1597359
Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 29978
||| ||||| || || || |||| || | |||| |||||| ||||||||||| |||
Sbjct 1597358 GTTGAAGGGAACACCCAGACCCAGATCACATGACCGCTGGTACAGCTGACACGACAGCCG 1597299
Query 29979 TCCGTCGCTCA----------------CGTAAAACTGACACATGGTGTGGCACGGAGGAA 30022
||| ||||||| |||| ||||| || | ||||||| |||||||
Sbjct 1597298 TCC-TCGCTCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAA 1597240
Query 30023 GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTG 30082
||||||| | || ||| |||||||||||| ||| ||||| || | ||| | |
Sbjct 1597239 GAGCCATTTTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAG 1597180
Query 30083 GGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 30139
||||| | ||| || || ||| | |||| ||||||||||| ||| || | ||
Sbjct 1597179 GGTTGGTTTTGAGAGTGTGGATCAC--CTGTTTG-AGCTGATCCACACCCTGGCCAGTGT 1597123
Query 30140 AGTCTGCCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACC 30198
| |||| ||| ||| |||| || ||||| ||||| | ||| ||||| || || ||
Sbjct 1597122 AATCTGTG-TCACAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACA 1597064
Query 30199 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 30258
||||||||||||||||| || || | || || ||| |||| ||| || ||||
Sbjct 1597063 GGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGAT 1597004
Query 30259 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 30318
|| || ||||||| || | | || ||| |||| ||| || || | ||
Sbjct 1597003 CCATTTCCGTCCCAAATATGAATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCG 1596944
Query 30319 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 30378
|| ||||| || |||||||||| ||| | |||| |||| ||| || || |
Sbjct 1596943 GCCACAAACCAGAGAAGCTCCTCCAAAACGCCTCGGTAAAAAACCCGCTTTGTGGTCAAC 1596884
Query 30379 AGGGG 30383
|||||
Sbjct 1596883 AGGGG 1596879
>seq2
Length=3147093
Score = 86.0 bits (94), Expect = 5e-12
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 52015 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 52074
||||||||||| | || | ||| ||| | ||| |||| || ||||||||||| |||
Sbjct 2760002 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 2759943
Query 52075 -TCACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCG 52131
|||||| || ||||| || || | | | | | ||| | ||||| ||||| |||
Sbjct 2759942 GTCACGGA-CAGAAGGGTACCATTGGTGTGACTTACAGACAC--GAGGATATGCCATTCT 2759886
Query 52132 ACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGA 52191
|| || | |||||||| |||||||||||||||||||| |||| || | ||||
Sbjct 2759885 CAGCCGAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTATGA 2759826
Query 52192 CCGT 52195
||||
Sbjct 2759825 CCGT 2759822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617395818893
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |