Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-16 seq11 98.7 8e-16 seq4 95.1 9e-15 >seq8 Length=911341 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || | ||| || ||| ||| || || || ||||| ||||| || |||| Sbjct 549470 AGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGG 549529 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||||||||| || || |||||||| || |||| ||||| |||||| Sbjct 549530 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCC 549589 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||||||||| | || Sbjct 549590 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 549649 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || |||||||||||||| Sbjct 549650 ATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687 >seq11 Length=586936 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || || ||| || || || ||||| || || ||| |||| |||| || Sbjct 305861 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 305802 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| || || || |||||||| || |||| ||||| ||||||||||| | Sbjct 305801 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 305742 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | ||| ||||| | || || || ||| Sbjct 305741 ATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTT 305682 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| || || ||||| |||||||| Sbjct 305681 CCAGTCAGGGTCTTGACAAAGATCTGCAT 305653 Score = 95.1 bits (104), Expect = 9e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || ||| ||| || || || ||||| || || ||| |||| |||| || Sbjct 305073 ACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 305014 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||||||||| || || |||||||| || |||| ||||| ||||||||||| | Sbjct 305013 AGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 304954 Query 48678 ATCTT 48682 ||||| Sbjct 304953 ATCTT 304949 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || || || ||||| || || || |||| |||| || | |||||||||||| || Sbjct 306071 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAG 306012 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || |||||||| || |||| ||| | ||||||||||| ||||| || || Sbjct 306011 ATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 305952 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | ||| ||||| | || || || ||||| || | || || || Sbjct 305951 TCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACG 305892 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 305891 AAAATCTGCAT 305881 >seq4 Length=2565013 Score = 95.1 bits (104), Expect = 9e-15 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || || || ||||| ||||| ||| |||| |||| || | |||| Sbjct 110143 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTCCTCGAGCTGC 110202 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || ||||| || ||||||||||| || |||| ||||| |||||||||||| Sbjct 110203 TTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 110252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937409650243