Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq3 360 4e-94
seq4 318 1e-81
seq2 123 5e-23
>seq3
Length=2716294
Score = 360 bits (398), Expect = 4e-94
Identities = 599/863 (69%), Gaps = 30/863 (3%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| |||||||||||||||| | || |||||||||||| |||||||||
Sbjct 857440 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGAT 857381
Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTC 25588
|| | ||||||||||| || |||| | |||| | ||| ||||||| | ||
Sbjct 857380 CTCGGCAAGGACATGGGCGACTGGGAGAACCGGCTCAA--CAACGACGAGCGGTTCTTCA 857323
Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648
|| | ||||| |||| |||||||| || || |||||||| ||||||||||| ||| |
Sbjct 857322 TCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATTGTGAACGAGAACCTGGTGG 857263
Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708
|| ||||| || | || |||||| | ||||||||||| |||||||| ||||||||
Sbjct 857262 AGCGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCA 857203
Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765
|| || || | ||||| || ||| | ||| ||||| || ||||| | |
Sbjct 857202 TGATGGAGAACATCCACTCGGAAACGTACTC---GCTGCTGATCGACACATACATCAAGG 857146
Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825
|| | ||| || ||||| ||||||||| ||| ||| ||||||||| ||
Sbjct 857145 ACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAGA 857086
Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTG 25884
|||| ||||| | ||||||||| | | | ||| | || |||||||||||||||
Sbjct 857085 AGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGT-CGACCTTTGGCGAGCGGCTG 857027
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
|||| ||||| || || ||||||||||| ||| ||| ||||| || |||||||||||
Sbjct 857026 ATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTCTGG 856967
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||||| || || ||||||||| || ||| ||||||||||||||| | | |||
Sbjct 856966 CTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGAC 856907
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA---A 26061
|||||||| |||| || |||||||| ||||||| | || ||| ||| | || |
Sbjct 856906 GAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCG---CAC---CTCGAGAACCGA 856853
Query 26062 CCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120
|| || |||| ||| ||| | | || ||||| || | |||||| |||||||
Sbjct 856852 CCCTC-CAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGTATCGAGCAGGAGTT 856794
Query 26121 TCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATA 26180
| | || |||||| || |||||| |||| ||
Sbjct 856793 CCTGACCGACGCCCTGCCCTGTGGTCTGCTCGGAATGAACGCCAAGCTCATGTGCCAGTA 856734
Query 26181 CATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGT 26238
|||||||| ||| ||||||| ||||||| ||| || || | ||| ||||||
Sbjct 856733 CATTGAGTTTGTCGCCGACCGTCTGCTGGTTGC--TCTCGGCAACTCCAAGGTCTACAAC 856676
Query 26239 ACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298
| | ||||| |||||||| ||||| ||||| ||| ||| || ||||||||||||||
Sbjct 856675 TCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTTC 856616
Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321
|| ||| |||| |||||| ||
Sbjct 856615 GAGAAGCGGGTGTCCGACTACCA 856593
>seq4
Length=2565013
Score = 318 bits (352), Expect = 1e-81
Identities = 966/1469 (66%), Gaps = 45/1469 (3%)
Strand=Plus/Minus
Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGT 221481
|||| |||||||||||||||| |||||| ||||||| |||||||||| ||
Sbjct 2495003 GGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTC 2494944
Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541
|||||||| || || | ||| || ||||| ||||| || || | | | |||||
Sbjct 2494943 GAAGGGCAGTCGGAGGGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGG 2494884
Query 221542 CCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAG 221601
| ||||| | ||||||| || || || || || || |||| ||| || |
Sbjct 2494883 TCGGTGTCGCATGTTGGACTTCTTGGCCTCAGGGACAGGGTAGTAGTTTCGGTCAATGAT 2494824
Query 221602 ATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACAC 221661
||||||||| | || || || | | ||| |||||||| | | | | |
Sbjct 2494823 GGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAA 2494764
Query 221662 CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTT 221721
| | | |||| | ||| | ||||| | | || || | | ||||||||
Sbjct 2494763 GGAGTTGGTCTCGTC-TCGAGTG-----ACAAAGGTGGGCAGAGCGATGGAAGCCAGGTT 2494710
Query 221722 ACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCA 221781
|| || || ||||| || | |||| | ||||| ||| |||||| |
Sbjct 2494709 GCAGACAGCGACCTCATCAGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGA 2494650
Query 221782 CTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCAT 221841
||||||||| ||||||| || || || ||||| || ||| |||||||||||||||||
Sbjct 2494649 CTTGATGGTACCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCAT 2494590
Query 221842 AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGC 221900
||||| || | ||| ||| ||||||| | || ||| || | ||||| |
Sbjct 2494589 GAAGGGGTTACCGGACTCGGTCTGGCAGTCCAGAATGTGGTACCACAGCT-TCTGGGCAG 2494531
Query 221901 TCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATAC--CCGGTATAGA-GCATGTCA 221956
| || | | ||| | ||||| ||| || ||| | ||| || || ||
Sbjct 2494530 GGATGGTTCG-TCGACCTCGGCCCTC---CTTCTCGTACTGCTCGTACAGCTGCTTG--- 2494478
Query 221957 AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAG 222016
|||| |||||||| | || || ||||| || ||| | ||| ||||| ||| ||||
Sbjct 2494477 AACTCGTCACCGTAGACGTCATCGAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAC 2494418
Query 222017 TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGA 222076
| ||| | | ||| | || |||||| ||||| || ||||| || ||| | || |||
Sbjct 2494417 TCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGAATCCAGAGAGCCAGGAACAGA 2494358
Query 222077 TCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATG 222136
|||| || || ||||||| |||| ||| || | ||| || | ||||| || | |
Sbjct 2494357 TCTCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACG 2494298
Query 222137 TCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGA 222196
||| ||||||| |||||||| || | ||| | || ||||||||||||||||| |||||
Sbjct 2494297 TCATCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGG 2494238
Query 222197 TCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252
|| | | | || || | |||| ||| || || | || || | ||||||||
Sbjct 2494237 TCGA----CGTATCGAGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGA 2494182
Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCC 222312
||||||||| || |||||| | ||| ||| | | ||| | |||| ||
Sbjct 2494181 GGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGACAGACC 2494122
Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372
|||||| || ||| || ||||| | || || ||||||| ||||| |||||| ||
Sbjct 2494121 GATACCTCCAGCGGACTTGGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAGATGCCGTC 2494062
Query 222373 CATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACA 222432
|| ||||| ||||| | ||| | || ||||| ||||||||||| | | || || |
Sbjct 2494061 GATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCC 2494002
Query 222433 GGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGT 222492
||||| |||| || || ||||| || ||||| |||||| | ||| ||
Sbjct 2494001 TGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAAGTACTTTTGAGACATGTAGTTGTAGGT 2493942
Query 222493 CTCTACGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGCGCATCTCATGTACATGT 222551
||| | | ||| ||| |||||||| ||||| || | | | | | || |||| ||| |
Sbjct 2493941 CTCAATGGCTCGGGCAATGTTGTCGCCGTGGATACCGACAGACAC-TCGCATGATCATCT 2493883
Query 222552 ACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAG 222608
|||||| | || | |||| || ||| || | |||||||| | | ||||| |
Sbjct 2493882 GCTGGGGTCGCTCGGCAACAGCGCCGTTG--ACTCG-CAGCAGGTAGGCTCGCTCCAGGG 2493826
Query 222609 TCTTGAACCCAAAGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGC 222667
||||||| |||||||||||| |||| ||||||| | ||| | | ||| ||| |||
Sbjct 2493825 TCTTGAAGCCAAAGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAATGGCTCCGTTGAGC 2493767
Query 222668 ---TCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTC 222724
|||| || || |||| | ||| | | || ||||| | ||| | || |
Sbjct 2493766 TCGTCCGCGTTCGCCTGTACGGT---GTCGTATAGCTCCTTGGACACCATGGGCGAGTGC 2493710
Query 222725 TCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTC 222783
| ||| || ||||| |||| |||||| || | | | | | || ||| | ||
Sbjct 2493709 TTCTTGTTGCGAGGGTTCACGTAGTGGTAGAGATCGTAGACCACCTGTGAAAACTGCTTC 2493650
Query 222784 GGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGG 222843
| |||||||||||||| || ||||||||||| || | |||| || ||||||| ||
Sbjct 2493649 TTG-GTCTGCTTGTGCAGGTTGGACACGGCGATTCGGGCAGCCAGAATCGCATAGTCGGG 2493591
Query 222844 GTGCACGGTGGTCATGCTGGCTAGGGTCT 222872
||||| ||||||||| ||| |||||
Sbjct 2493590 GTGCAGAGTGGTCATGTAGGCCGCGGTCT 2493562
>seq2
Length=3147093
Score = 123 bits (136), Expect = 5e-23
Identities = 394/602 (65%), Gaps = 18/602 (3%)
Strand=Plus/Minus
Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091
|||| || |||||| |||||||| | ||||| || | || || ||||| | | | |
Sbjct 1304373 ACCCGCTTCATGAACAGGTCCGGCACCCACAATGCGTAGAACAGGTCTCTTGCTCTGTTC 1304314
Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151
|| ||| | |||| |||||||| ||| | || || || || || || || ||||| |||
Sbjct 1304313 TCTTCCGCTCCGTGGTTTTTCCGCAGGTTCAGGAAATCGAATATATCCGCATGCCAGGGC 1304254
Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCC 222211
|||||||||| ||| | || ||||| |||||||| |||||||| || | ||| | |
Sbjct 1304253 TCCAGATAGATGGCAAACGCTCCGGGACGCTTGTTCCCACCCTGGTCGA-CATACCGCGC 1304195
Query 222212 AGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTT 222270
|| | |||||| | | || | || || | || |||| | || | | || |
Sbjct 1304194 AGTGTTGTTGAAAACCCTGAGCATGGGAACAATACCACTGGACCTTCCCTGAGACCCAGT 1304135
Query 222271 AATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTT 222330
|||| ||||| ||| || | ||| | || |||||||| || || |||
Sbjct 1304134 AATGATAGCACCCTTGGCTCTGATATTATGAATATGCAGACCGATACCTCCAGCCGTTTT 1304075
Query 222331 CGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGAC 222390
|||||| || || ||||||| || || ||| || || || ||||| || |
Sbjct 1304074 CGAGATTTGCGCACACGTCTTGAGGGTATCGTAGATTCCGTCGATGGAGTC--GGATGCC 1304017
Query 222391 GT--TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTG 222448
| || ||||||||| ||||||| || | || | || ||| || || ||||||
Sbjct 1304016 ATAGCCACCAGAAAACAGGACGACAGTTGTCCCTGGGGAGTACCGGCATTGAAAAGCGTG 1303957
Query 222449 GGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATC---GTACGTCTCTACGACTCTG 222505
||| |||||||| || | || | |||| | |||||| || | || ||
Sbjct 1303956 GGAGAAGCGTGTGTGAATT---TTCTGAGCGACAGAGCCGTGTACGTTTCCAGCACCTTG 1303900
Query 222506 GCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCC 222565
||||| | ||| || || ||| || || | |||| ||| | || || | ||
Sbjct 1303899 GCGATATCGTCTCCATGGATCCCCAGAGCCACGCGCATGAGCATATGTTGAGGACGTTCA 1303840
Query 222566 ACAGGAC--CCT-TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAG 222622
|| || ||| || || |||| |||||| |||||||| |||||||| ||||||
Sbjct 1303839 ACTATACTTCCTCCGGTTCT---TAGCAAGTACGACTTTTCCAGCGTCTTGAAGCCAAAG 1303783
Query 222623 TA 222624
||
Sbjct 1303782 TA 1303781
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGT 221481
||||||||||||||||||||| ||||| | | ||||||| ||||| |||
Sbjct 1304986 GGCAGCGTGGTAGATGGTCTCGAAGATGAGCACGTTGAGTTCGGCAGCCTCAGGACTGTC 1304927
Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541
| ||||||| ||||| || ||| ||||| ||||||||||| ||||| | | || ||
Sbjct 1304926 GTAGGGCATGCGCAGTTTCATAAACACGTCTGCCAGTCCCTGAACTCCCACGGCAATCGG 1304867
Query 221542 CCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAG 221601
| || | | |||| || | | || || ||||| || ||||| | ||||| |
Sbjct 1304866 ACGATGGCGCTTGTTCGACGTTTCTGCCTCCTTGACGGGGTAGCAGTTGGCCTCGATGAT 1304807
Query 221602 ATTGTTGAGGTTCAGAGTGATGACTTTAAC 221631
|||||||||| | || ||| ||| ||
Sbjct 1304806 GCTGTTGAGGTTGCGGGTCATGTGTTTGAC 1304777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844323967040
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