Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 360 4e-94 seq4 318 1e-81 seq2 123 5e-23 >seq3 Length=2716294 Score = 360 bits (398), Expect = 4e-94 Identities = 599/863 (69%), Gaps = 30/863 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | || |||||||||||| ||||||||| Sbjct 857440 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGAT 857381 Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTC 25588 || | ||||||||||| || |||| | |||| | ||| ||||||| | || Sbjct 857380 CTCGGCAAGGACATGGGCGACTGGGAGAACCGGCTCAA--CAACGACGAGCGGTTCTTCA 857323 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || | ||||| |||| |||||||| || || |||||||| ||||||||||| ||| | Sbjct 857322 TCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATTGTGAACGAGAACCTGGTGG 857263 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || ||||| || | || |||||| | ||||||||||| |||||||| |||||||| Sbjct 857262 AGCGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCA 857203 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || || || | ||||| || ||| | ||| ||||| || ||||| | | Sbjct 857202 TGATGGAGAACATCCACTCGGAAACGTACTC---GCTGCTGATCGACACATACATCAAGG 857146 Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || | ||| || ||||| ||||||||| ||| ||| ||||||||| || Sbjct 857145 ACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAGA 857086 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTG 25884 |||| ||||| | ||||||||| | | | ||| | || ||||||||||||||| Sbjct 857085 AGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGT-CGACCTTTGGCGAGCGGCTG 857027 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 |||| ||||| || || ||||||||||| ||| ||| ||||| || ||||||||||| Sbjct 857026 ATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTCTGG 856967 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||||||| || ||| ||||||||||||||| | | ||| Sbjct 856966 CTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGAC 856907 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA---A 26061 |||||||| |||| || |||||||| ||||||| | || ||| ||| | || | Sbjct 856906 GAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCG---CAC---CTCGAGAACCGA 856853 Query 26062 CCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 || || |||| ||| ||| | | || ||||| || | |||||| ||||||| Sbjct 856852 CCCTC-CAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGTATCGAGCAGGAGTT 856794 Query 26121 TCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATA 26180 | | || |||||| || |||||| |||| || Sbjct 856793 CCTGACCGACGCCCTGCCCTGTGGTCTGCTCGGAATGAACGCCAAGCTCATGTGCCAGTA 856734 Query 26181 CATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGT 26238 |||||||| ||| ||||||| ||||||| ||| || || | ||| |||||| Sbjct 856733 CATTGAGTTTGTCGCCGACCGTCTGCTGGTTGC--TCTCGGCAACTCCAAGGTCTACAAC 856676 Query 26239 ACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298 | | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| Sbjct 856675 TCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTTC 856616 Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321 || ||| |||| |||||| || Sbjct 856615 GAGAAGCGGGTGTCCGACTACCA 856593 >seq4 Length=2565013 Score = 318 bits (352), Expect = 1e-81 Identities = 966/1469 (66%), Gaps = 45/1469 (3%) Strand=Plus/Minus Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGT 221481 |||| |||||||||||||||| |||||| ||||||| |||||||||| || Sbjct 2495003 GGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTC 2494944 Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 |||||||| || || | ||| || ||||| ||||| || || | | | ||||| Sbjct 2494943 GAAGGGCAGTCGGAGGGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGG 2494884 Query 221542 CCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAG 221601 | ||||| | ||||||| || || || || || || |||| ||| || | Sbjct 2494883 TCGGTGTCGCATGTTGGACTTCTTGGCCTCAGGGACAGGGTAGTAGTTTCGGTCAATGAT 2494824 Query 221602 ATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACAC 221661 ||||||||| | || || || | | ||| |||||||| | | | | | Sbjct 2494823 GGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAA 2494764 Query 221662 CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTT 221721 | | | |||| | ||| | ||||| | | || || | | |||||||| Sbjct 2494763 GGAGTTGGTCTCGTC-TCGAGTG-----ACAAAGGTGGGCAGAGCGATGGAAGCCAGGTT 2494710 Query 221722 ACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCA 221781 || || || ||||| || | |||| | ||||| ||| |||||| | Sbjct 2494709 GCAGACAGCGACCTCATCAGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGA 2494650 Query 221782 CTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCAT 221841 ||||||||| ||||||| || || || ||||| || ||| ||||||||||||||||| Sbjct 2494649 CTTGATGGTACCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCAT 2494590 Query 221842 AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGC 221900 ||||| || | ||| ||| ||||||| | || ||| || | ||||| | Sbjct 2494589 GAAGGGGTTACCGGACTCGGTCTGGCAGTCCAGAATGTGGTACCACAGCT-TCTGGGCAG 2494531 Query 221901 TCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATAC--CCGGTATAGA-GCATGTCA 221956 | || | | ||| | ||||| ||| || ||| | ||| || || || Sbjct 2494530 GGATGGTTCG-TCGACCTCGGCCCTC---CTTCTCGTACTGCTCGTACAGCTGCTTG--- 2494478 Query 221957 AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAG 222016 |||| |||||||| | || || ||||| || ||| | ||| ||||| ||| |||| Sbjct 2494477 AACTCGTCACCGTAGACGTCATCGAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAC 2494418 Query 222017 TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGA 222076 | ||| | | ||| | || |||||| ||||| || ||||| || ||| | || ||| Sbjct 2494417 TCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGAATCCAGAGAGCCAGGAACAGA 2494358 Query 222077 TCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATG 222136 |||| || || ||||||| |||| ||| || | ||| || | ||||| || | | Sbjct 2494357 TCTCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACG 2494298 Query 222137 TCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGA 222196 ||| ||||||| |||||||| || | ||| | || ||||||||||||||||| ||||| Sbjct 2494297 TCATCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGG 2494238 Query 222197 TCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 || | | | || || | |||| ||| || || | || || | |||||||| Sbjct 2494237 TCGA----CGTATCGAGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGA 2494182 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCC 222312 ||||||||| || |||||| | ||| ||| | | ||| | |||| || Sbjct 2494181 GGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGACAGACC 2494122 Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372 |||||| || ||| || ||||| | || || ||||||| ||||| |||||| || Sbjct 2494121 GATACCTCCAGCGGACTTGGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAGATGCCGTC 2494062 Query 222373 CATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACA 222432 || ||||| ||||| | ||| | || ||||| ||||||||||| | | || || | Sbjct 2494061 GATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCC 2494002 Query 222433 GGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGT 222492 ||||| |||| || || ||||| || ||||| |||||| | ||| || Sbjct 2494001 TGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAAGTACTTTTGAGACATGTAGTTGTAGGT 2493942 Query 222493 CTCTACGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGCGCATCTCATGTACATGT 222551 ||| | | ||| ||| |||||||| ||||| || | | | | | || |||| ||| | Sbjct 2493941 CTCAATGGCTCGGGCAATGTTGTCGCCGTGGATACCGACAGACAC-TCGCATGATCATCT 2493883 Query 222552 ACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAG 222608 |||||| | || | |||| || ||| || | |||||||| | | ||||| | Sbjct 2493882 GCTGGGGTCGCTCGGCAACAGCGCCGTTG--ACTCG-CAGCAGGTAGGCTCGCTCCAGGG 2493826 Query 222609 TCTTGAACCCAAAGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGC 222667 ||||||| |||||||||||| |||| ||||||| | ||| | | ||| ||| ||| Sbjct 2493825 TCTTGAAGCCAAAGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAATGGCTCCGTTGAGC 2493767 Query 222668 ---TCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTC 222724 |||| || || |||| | ||| | | || ||||| | ||| | || | Sbjct 2493766 TCGTCCGCGTTCGCCTGTACGGT---GTCGTATAGCTCCTTGGACACCATGGGCGAGTGC 2493710 Query 222725 TCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTC 222783 | ||| || ||||| |||| |||||| || | | | | | || ||| | || Sbjct 2493709 TTCTTGTTGCGAGGGTTCACGTAGTGGTAGAGATCGTAGACCACCTGTGAAAACTGCTTC 2493650 Query 222784 GGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGG 222843 | |||||||||||||| || ||||||||||| || | |||| || ||||||| || Sbjct 2493649 TTG-GTCTGCTTGTGCAGGTTGGACACGGCGATTCGGGCAGCCAGAATCGCATAGTCGGG 2493591 Query 222844 GTGCACGGTGGTCATGCTGGCTAGGGTCT 222872 ||||| ||||||||| ||| ||||| Sbjct 2493590 GTGCAGAGTGGTCATGTAGGCCGCGGTCT 2493562 >seq2 Length=3147093 Score = 123 bits (136), Expect = 5e-23 Identities = 394/602 (65%), Gaps = 18/602 (3%) Strand=Plus/Minus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 |||| || |||||| |||||||| | ||||| || | || || ||||| | | | | Sbjct 1304373 ACCCGCTTCATGAACAGGTCCGGCACCCACAATGCGTAGAACAGGTCTCTTGCTCTGTTC 1304314 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 || ||| | |||| |||||||| ||| | || || || || || || || ||||| ||| Sbjct 1304313 TCTTCCGCTCCGTGGTTTTTCCGCAGGTTCAGGAAATCGAATATATCCGCATGCCAGGGC 1304254 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCC 222211 |||||||||| ||| | || ||||| |||||||| |||||||| || | ||| | | Sbjct 1304253 TCCAGATAGATGGCAAACGCTCCGGGACGCTTGTTCCCACCCTGGTCGA-CATACCGCGC 1304195 Query 222212 AGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTT 222270 || | |||||| | | || | || || | || |||| | || | | || | Sbjct 1304194 AGTGTTGTTGAAAACCCTGAGCATGGGAACAATACCACTGGACCTTCCCTGAGACCCAGT 1304135 Query 222271 AATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTT 222330 |||| ||||| ||| || | ||| | || |||||||| || || ||| Sbjct 1304134 AATGATAGCACCCTTGGCTCTGATATTATGAATATGCAGACCGATACCTCCAGCCGTTTT 1304075 Query 222331 CGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGAC 222390 |||||| || || ||||||| || || ||| || || || ||||| || | Sbjct 1304074 CGAGATTTGCGCACACGTCTTGAGGGTATCGTAGATTCCGTCGATGGAGTC--GGATGCC 1304017 Query 222391 GT--TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTG 222448 | || ||||||||| ||||||| || | || | || ||| || || |||||| Sbjct 1304016 ATAGCCACCAGAAAACAGGACGACAGTTGTCCCTGGGGAGTACCGGCATTGAAAAGCGTG 1303957 Query 222449 GGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATC---GTACGTCTCTACGACTCTG 222505 ||| |||||||| || | || | |||| | |||||| || | || || Sbjct 1303956 GGAGAAGCGTGTGTGAATT---TTCTGAGCGACAGAGCCGTGTACGTTTCCAGCACCTTG 1303900 Query 222506 GCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCC 222565 ||||| | ||| || || ||| || || | |||| ||| | || || | || Sbjct 1303899 GCGATATCGTCTCCATGGATCCCCAGAGCCACGCGCATGAGCATATGTTGAGGACGTTCA 1303840 Query 222566 ACAGGAC--CCT-TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAG 222622 || || ||| || || |||| |||||| |||||||| |||||||| |||||| Sbjct 1303839 ACTATACTTCCTCCGGTTCT---TAGCAAGTACGACTTTTCCAGCGTCTTGAAGCCAAAG 1303783 Query 222623 TA 222624 || Sbjct 1303782 TA 1303781 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGT 221481 ||||||||||||||||||||| ||||| | | ||||||| ||||| ||| Sbjct 1304986 GGCAGCGTGGTAGATGGTCTCGAAGATGAGCACGTTGAGTTCGGCAGCCTCAGGACTGTC 1304927 Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 | ||||||| ||||| || ||| ||||| ||||||||||| ||||| | | || || Sbjct 1304926 GTAGGGCATGCGCAGTTTCATAAACACGTCTGCCAGTCCCTGAACTCCCACGGCAATCGG 1304867 Query 221542 CCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAG 221601 | || | | |||| || | | || || ||||| || ||||| | ||||| | Sbjct 1304866 ACGATGGCGCTTGTTCGACGTTTCTGCCTCCTTGACGGGGTAGCAGTTGGCCTCGATGAT 1304807 Query 221602 ATTGTTGAGGTTCAGAGTGATGACTTTAAC 221631 |||||||||| | || ||| ||| || Sbjct 1304806 GCTGTTGAGGTTGCGGGTCATGTGTTTGAC 1304777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844323967040