Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 1e-24
seq9 129 4e-24
seq1 120 2e-21
>seq5
Length=2157754
Score = 131 bits (144), Expect = 1e-24
Identities = 368/554 (66%), Gaps = 12/554 (2%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| ||||| || || || || | ||
Sbjct 2156369 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCACTTCGCCAAC-GATAG 2156311
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||||| || || | ||| | || ||
Sbjct 2156310 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCCTTCAC 2156251
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || || || || |||| ||
Sbjct 2156250 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 2156191
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || |||||||||| || ||||| ||| | |||||
Sbjct 2156190 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGATCCTGAGGTCCAGAA 2156131
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627
||| || | ||||| ||| | || | | ||| || || | || || |
Sbjct 2156130 TGACGCCAAGCACTTCCCTTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 2156071
Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| | | | || || | || ||| | || ||| |||||||||| ||| || |
Sbjct 2156070 CGAGTTTAAG--GGCGAGATCAAGGTCTTTACTCCCGAAGAAATTTCTTCCATGATTCTC 2156013
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742
| || ||||| | || || ||| ||| |||||| |||| | ||| || || ||
Sbjct 2156012 ACAAAGATGAAGGAGACTGCTGAGGG-ATACCTTGGAACCAAGGTG-AAC-GACGCTGTC 2155956
Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802
||||||||||| || || || ||||||||||| || || || || || || || ||
Sbjct 2155955 ATTACTGTTCCCGCTTACTTCAATGATTCTCAGCGGCAGGCTACCAAGGACGCTGGTCTG 2155896
Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862
||||| ||||| || || | || ||||| || || || || ||||| |||| ||
Sbjct 2155895 ATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCCGCCGCCATTGCCTAC 2155836
Query 474863 GGTCTTGATAAGAA 474876
|| ||||| |||||
Sbjct 2155835 GGCCTTGACAAGAA 2155822
>seq9
Length=908501
Score = 129 bits (142), Expect = 4e-24
Identities = 364/552 (66%), Gaps = 8/552 (1%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| ||||| || ||| || || | |
Sbjct 29904 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCTAAC-GACAG 29962
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||||| || || | ||| |||| ||
Sbjct 29963 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCTTTCAC 30022
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || || || || |||| ||
Sbjct 30023 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 30082
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || |||||||||| || ||||| || | |||||
Sbjct 30083 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGAA 30142
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626
||| || | || || ||| | || || ||||| || || | || || |
Sbjct 30143 TGACGCCAAGCACTTCCCCTTCAAGATCATCGATAAGGGTGGAAAGCCCAACATCGAGGT 30202
Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| | | | ||||| || || || | || ||| |||| || || ||| || |
Sbjct 30203 CGAGTTTAAG--GGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCTC 30260
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
| || ||||| | || || ||| ||| |||||| | || | || || || ||
Sbjct 30261 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACTAAGGTGAACGACGCTGTCAT 30319
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
||| ||||| || || || ||||||||||| || || || || || || || || ||
Sbjct 30320 TACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCTGGTCTTAT 30379
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||| ||||| || ||| | || || || || || || || ||||| |||| || ||
Sbjct 30380 TGCTGGTCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCCATTGCCTACGG 30439
Query 474865 TCTTGATAAGAA 474876
|||||| |||||
Sbjct 30440 TCTTGACAAGAA 30451
Score = 123 bits (136), Expect = 2e-22
Identities = 526/825 (64%), Gaps = 14/825 (2%)
Strand=Plus/Plus
Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421
|| || |||||||| | ||||| |||||||| || ||||| || |||| || | ||
Sbjct 30549 GCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC 30608
Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAAC--ATCTGCTAAAGC 475479
| |||| | || |||||| | || | || || | || || | | || | ||
Sbjct 30609 --TTTGTTCAGGAGTTCAAGCGAAAGCACAAGAAGGACATCTCGACCAACCAGCGA--GC 30664
Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCA 475539
| |||| || |||| || ||||| || || |||||| ||||||| ||| | ||||
Sbjct 30665 TCTCCGACGACTGCGAACCGCCTGTGAGCGAGCCAAGCGAACTCTTTCATCTTCCGCTCA 30724
Query 475540 AACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAG 475599
||| | ||||| | || ||||| | || || ||||||| | || || || |
Sbjct 30725 GACTTCCATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCG 30784
Query 475600 GGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACA 475659
|| ||| || || | ||| ||||| || || || |||| || ||||| |
Sbjct 30785 AGCCCGATTCGAGGAGCTCTGTCAGGATCTYTTCCGAGGCACTCTTGAGCCTGTTGAGAA 30844
Query 475660 AGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGG 475719
||||| | || | || | ||||| | ||| | || ||||| ||||| || ||
Sbjct 30845 GGTTCTGAAGGACGCCAAGATGGACAAGGCCTCYGTCAACGAGATTGTCCTTGTTGGTGG 30904
Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGT 475778
|| || |||| || || | |||| | | | | | || || || || ||
Sbjct 30905 CTCCACTCGAATCCCCAAGGTCC-AGAAGCTCGTGTCTGACTTCTTCAACGGCAAGGAGC 30963
Query 475779 TAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838
| || | | || |||||||| |||||||| || |||||||| || || || ||||
Sbjct 30964 TGAACCGATCGATCAACCCTGATGAGGCTGTTGCYTACGGAGCTGCYGTYCAGGCTGCTA 31023
Query 475839 TTTTATCAGGTCAATCAGACGAGAAACTAAATA--ATATTGTACTTGTTGACGTAACTCC 475896
|| | || ||| | || ||| | | ||| | || |||| || ||||
Sbjct 31024 TTCTGTCTGGTGA--CACTTCTTCYTCTACCCAGGACATTCTGCTCCTTGATGTTGCTCC 31081
Query 475897 ACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATAC 475956
|| || | ||| | || || | ||| || ||||||| || || || | |||| |
Sbjct 31082 TCTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTC 31141
Query 475957 TCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGT 476016
| || || ||| || || | || ||||| || |||| || || | |||
Sbjct 31142 GACYATTCCCACCAAGAAGTCYGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGT 31201
Query 476017 AACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAAC 476076
||||| |||| || ||||| || || || || || |||| ||||| |
Sbjct 31202 TCTGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAA 31261
Query 476077 TTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTT 476136
||| | ||| ||||||||||||||||| |||| |||||||| ||||| || || ||
Sbjct 31262 GTTTGAGCTTTCCGGTATTCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTT 31321
Query 476137 TGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
||| | || || || |||||||| || || ||||| ||| ||
Sbjct 31322 CGATGTCGACGCCAACGGTATTCTCAACGTCTCTGCTGTTGAGAA 31366
>seq1
Length=3339266
Score = 120 bits (132), Expect = 2e-21
Identities = 327/494 (66%), Gaps = 10/494 (2%)
Strand=Plus/Minus
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||||| || || | ||| | || ||
Sbjct 3323645 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCCTTCAC 3323586
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || || || || |||| ||
Sbjct 3323585 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 3323526
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || |||||||||| || ||||| ||| | |||||
Sbjct 3323525 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGATCCTGAGGTCCAGAA 3323466
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626
||| || | ||||| ||| | || | | ||| || || | || || |
Sbjct 3323465 TGACGCCAAGCACTTCCCTTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 3323406
Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| | | | || || || || ||| | || ||| |||| || || ||| || |
Sbjct 3323405 CGAGTTTAAG--GGCGAGACCAAGGTCTTTACTCCCGAAGAAATCTCCTCTATGATTCTC 3323348
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742
| || ||||| | || || ||| ||| |||||| |||| || | || || ||
Sbjct 3323347 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACCAAG--GTGAACGACGCTGTC 3323291
Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802
||||| ||||| || || || ||||||||||| || || || || || || || ||
Sbjct 3323290 ATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCTGGTCTT 3323231
Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862
||||| ||||| || || | || ||||| || || || || ||||| |||| ||
Sbjct 3323230 ATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCCGCCGCCATTGCCTAC 3323171
Query 474863 GGTCTTGATAAGAA 474876
|| ||||| |||||
Sbjct 3323170 GGCCTTGACAAGAA 3323157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177441311068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |