Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq5 131 1e-24 seq9 129 4e-24 seq1 120 2e-21 >seq5 Length=2157754 Score = 131 bits (144), Expect = 1e-24 Identities = 368/554 (66%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387 ||| | || || ||| | ||||| || ||| ||||| || || || || | || Sbjct 2156369 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCACTTCGCCAAC-GATAG 2156311 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| || ||||||||||| || || ||||||| || || | ||| | || || Sbjct 2156310 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCCTTCAC 2156251 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || ||||||| || ||||| |||||||| || | || || || || |||| || Sbjct 2156250 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 2156191 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | ||||| || || || |||||||||| || ||||| ||| | ||||| Sbjct 2156190 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGATCCTGAGGTCCAGAA 2156131 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 ||| || | ||||| ||| | || | | ||| || || | || || | Sbjct 2156130 TGACGCCAAGCACTTCCCTTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 2156071 Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | | | | || || | || ||| | || ||| |||||||||| ||| || | Sbjct 2156070 CGAGTTTAAG--GGCGAGATCAAGGTCTTTACTCCCGAAGAAATTTCTTCCATGATTCTC 2156013 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742 | || ||||| | || || ||| ||| |||||| |||| | ||| || || || Sbjct 2156012 ACAAAGATGAAGGAGACTGCTGAGGG-ATACCTTGGAACCAAGGTG-AAC-GACGCTGTC 2155956 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 ||||||||||| || || || ||||||||||| || || || || || || || || Sbjct 2155955 ATTACTGTTCCCGCTTACTTCAATGATTCTCAGCGGCAGGCTACCAAGGACGCTGGTCTG 2155896 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||| || || | || ||||| || || || || ||||| |||| || Sbjct 2155895 ATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCCGCCGCCATTGCCTAC 2155836 Query 474863 GGTCTTGATAAGAA 474876 || ||||| ||||| Sbjct 2155835 GGCCTTGACAAGAA 2155822 >seq9 Length=908501 Score = 129 bits (142), Expect = 4e-24 Identities = 364/552 (66%), Gaps = 8/552 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAA 474387 ||| | || || ||| | ||||| || ||| ||||| || ||| || || | | Sbjct 29904 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCTAAC-GACAG 29962 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| || ||||||||||| || || ||||||| || || | ||| |||| || Sbjct 29963 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCTTTCAC 30022 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || ||||||| || ||||| |||||||| || | || || || || |||| || Sbjct 30023 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 30082 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | ||||| || || || |||||||||| || ||||| || | ||||| Sbjct 30083 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGAA 30142 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||| || | || || ||| | || || ||||| || || | || || | Sbjct 30143 TGACGCCAAGCACTTCCCCTTCAAGATCATCGATAAGGGTGGAAAGCCCAACATCGAGGT 30202 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | | | | ||||| || || || | || ||| |||| || || ||| || | Sbjct 30203 CGAGTTTAAG--GGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCTC 30260 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 | || ||||| | || || ||| ||| |||||| | || | || || || || Sbjct 30261 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACTAAGGTGAACGACGCTGTCAT 30319 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||| ||||| || || || ||||||||||| || || || || || || || || || Sbjct 30320 TACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCTGGTCTTAT 30379 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||||| || ||| | || || || || || || || ||||| |||| || || Sbjct 30380 TGCTGGTCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCCATTGCCTACGG 30439 Query 474865 TCTTGATAAGAA 474876 |||||| ||||| Sbjct 30440 TCTTGACAAGAA 30451 Score = 123 bits (136), Expect = 2e-22 Identities = 526/825 (64%), Gaps = 14/825 (2%) Strand=Plus/Plus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 || || |||||||| | ||||| |||||||| || ||||| || |||| || | || Sbjct 30549 GCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC 30608 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAAC--ATCTGCTAAAGC 475479 | |||| | || |||||| | || | || || | || || | | || | || Sbjct 30609 --TTTGTTCAGGAGTTCAAGCGAAAGCACAAGAAGGACATCTCGACCAACCAGCGA--GC 30664 Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCA 475539 | |||| || |||| || ||||| || || |||||| ||||||| ||| | |||| Sbjct 30665 TCTCCGACGACTGCGAACCGCCTGTGAGCGAGCCAAGCGAACTCTTTCATCTTCCGCTCA 30724 Query 475540 AACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAG 475599 ||| | ||||| | || ||||| | || || ||||||| | || || || | Sbjct 30725 GACTTCCATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCG 30784 Query 475600 GGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACA 475659 || ||| || || | ||| ||||| || || || |||| || ||||| | Sbjct 30785 AGCCCGATTCGAGGAGCTCTGTCAGGATCTYTTCCGAGGCACTCTTGAGCCTGTTGAGAA 30844 Query 475660 AGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGG 475719 ||||| | || | || | ||||| | ||| | || ||||| ||||| || || Sbjct 30845 GGTTCTGAAGGACGCCAAGATGGACAAGGCCTCYGTCAACGAGATTGTCCTTGTTGGTGG 30904 Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGT 475778 || || |||| || || | |||| | | | | | || || || || || Sbjct 30905 CTCCACTCGAATCCCCAAGGTCC-AGAAGCTCGTGTCTGACTTCTTCAACGGCAAGGAGC 30963 Query 475779 TAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838 | || | | || |||||||| |||||||| || |||||||| || || || |||| Sbjct 30964 TGAACCGATCGATCAACCCTGATGAGGCTGTTGCYTACGGAGCTGCYGTYCAGGCTGCTA 31023 Query 475839 TTTTATCAGGTCAATCAGACGAGAAACTAAATA--ATATTGTACTTGTTGACGTAACTCC 475896 || | || ||| | || ||| | | ||| | || |||| || |||| Sbjct 31024 TTCTGTCTGGTGA--CACTTCTTCYTCTACCCAGGACATTCTGCTCCTTGATGTTGCTCC 31081 Query 475897 ACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATAC 475956 || || | ||| | || || | ||| || ||||||| || || || | |||| | Sbjct 31082 TCTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTC 31141 Query 475957 TCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGT 476016 | || || ||| || || | || ||||| || |||| || || | ||| Sbjct 31142 GACYATTCCCACCAAGAAGTCYGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGT 31201 Query 476017 AACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAAC 476076 ||||| |||| || ||||| || || || || || |||| ||||| | Sbjct 31202 TCTGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAA 31261 Query 476077 TTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTT 476136 ||| | ||| ||||||||||||||||| |||| |||||||| ||||| || || || Sbjct 31262 GTTTGAGCTTTCCGGTATTCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTT 31321 Query 476137 TGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||| | || || || |||||||| || || ||||| ||| || Sbjct 31322 CGATGTCGACGCCAACGGTATTCTCAACGTCTCTGCTGTTGAGAA 31366 >seq1 Length=3339266 Score = 120 bits (132), Expect = 2e-21 Identities = 327/494 (66%), Gaps = 10/494 (2%) Strand=Plus/Minus Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| || ||||||||||| || || ||||||| || || | ||| | || || Sbjct 3323645 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCCTTCAC 3323586 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || ||||||| || ||||| |||||||| || | || || || || |||| || Sbjct 3323585 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 3323526 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | ||||| || || || |||||||||| || ||||| ||| | ||||| Sbjct 3323525 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGATCCTGAGGTCCAGAA 3323466 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||| || | ||||| ||| | || | | ||| || || | || || | Sbjct 3323465 TGACGCCAAGCACTTCCCTTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 3323406 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | | | | || || || || ||| | || ||| |||| || || ||| || | Sbjct 3323405 CGAGTTTAAG--GGCGAGACCAAGGTCTTTACTCCCGAAGAAATCTCCTCTATGATTCTC 3323348 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742 | || ||||| | || || ||| ||| |||||| |||| || | || || || Sbjct 3323347 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACCAAG--GTGAACGACGCTGTC 3323291 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 ||||| ||||| || || || ||||||||||| || || || || || || || || Sbjct 3323290 ATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCTGGTCTT 3323231 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||| || || | || ||||| || || || || ||||| |||| || Sbjct 3323230 ATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCCGCCGCCATTGCCTAC 3323171 Query 474863 GGTCTTGATAAGAA 474876 || ||||| ||||| Sbjct 3323170 GGCCTTGACAAGAA 3323157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177441311068