Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 145 2e-29
seq2 89.7 2e-12
seq7 86.0 2e-11
>seq4
Length=2565013
Score = 145 bits (160), Expect = 2e-29
Identities = 570/882 (65%), Gaps = 21/882 (2%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||||||| || |||||||| ||| ||||||||| || | |||||||||||
Sbjct 2494682 GTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTACCCAGGTTCTTCTGGTT 2494623
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| || | ||| || || |||||||| || ||| | ||| | || | ||| ||||
Sbjct 2494622 GGACTTTCGGTTGCAGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGACTCGGTCTGGCA 2494563
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCTTCCG 155808
||||||||| | ||| || | ||||| | | | | || | || ||| |||
Sbjct 2494562 GTCCAGAATGTGGTACCACAGCTTCTGGGCAGGGA-TGGTTCGTCGACCTCGGCCCTCCT 2494504
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
||| || | | |||||| | | || |||||||| ||| || |||||||
Sbjct 2494503 TCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCACCGTAGACGTCATCGAGGCCAGGGC 2494444
Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACA 155927
||| | |||||| | || | || | | | | | | || |||||||| || |
Sbjct 2494443 ACTCGTTGGGGCACATGAGAGTCC-ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGG 2494385
Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA--CTCCTCATCGCCGTGAT 155985
|| ||| | ||| ||| || || | || | || |||||| | ||||| |
Sbjct 2494384 TCGGGAATCCAGAGAGCCAGGAACAGATCTCGGGC--TCGAATCTCCTCCTTACCGTGGT 2494327
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
|||| || ||||| |||| || | ||| || |||||||| ||||| ||||
Sbjct 2494326 TCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCCAGGTACATGGCAA 2494267
Query 156046 A-ACTACCATT--CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
| || | | | | ||||| ||||| || || || ||||| || || ||| ||||||
Sbjct 2494266 AGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCGACGTATCGAGCGGTGTTGTTGTAGACAC 2494207
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
||||| || | ||||| ||||| || || ||||||||| ||| | || || | |
Sbjct 2494206 GCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGG 2494147
Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222
|| | || || || || || ||||| || | | || || || |||| ||
Sbjct 2494146 CTCGGATGTTGTGGATGGACAGACCGATACCTCCAGCGGACTTGGAGATGAGAGCACAAG 2494087
Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATAGCA 156280
||| | || | | | || || || || || || || | || |||| | || | ||
Sbjct 2494086 TCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACA--AGGAAACA 2494029
Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340
||| | || || | || ||||| |||||| | || ||||| | || || | ||
Sbjct 2494028 CGACGACATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAA 2493969
Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAAT--CT-TCTCAAGATTAGACCCGTG 156397
||||| | |||||| || | ||| ||||| ||| || ||| || |||||
Sbjct 2493968 GTACTTTTGAGACATGTAGTTGTAGGTCTC---AATGGCTCGGGCAATGTTGTCGCCGTG 2493912
Query 156398 AATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457
|||| || ||| || | ||| ||| ||||| || ||||| ||| | || | |
Sbjct 2493911 GATACCGACAGACACTCGCATGATCATCTGCTGGGGTCGCTCGGCAACAGCGCCGTTGAC 2493852
Query 156458 TCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|||||| ||||| || || ||||| || || || || || ||
Sbjct 2493851 TCGCAGCAGGTAGGCTCGCTCCAGGGTCTTGAAGCCAAAGTA 2493810
>seq2
Length=3147093
Score = 89.7 bits (98), Expect = 2e-12
Identities = 216/325 (66%), Gaps = 3/325 (1%)
Strand=Plus/Minus
Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTA 155994
|||| | || ||||| ||||| ||||| | ||| || | ||||| || ||||| |
Sbjct 1304348 CCCACAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCTTCCGCTCCGTGGTTTTTCCGCA 1304289
Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA-ACTAC-- 156051
| | | ||| || ||||| | ||| ||||||||||| || ||||| || |
Sbjct 1304288 GGTTCAGGAAATCGAATATATCCGCATGCCAGGGCTCCAGATAGATGGCAAACGCTCCGG 1304229
Query 156052 CATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111
| | | || |||||||| || |||||||| ||||| || ||||| || | ||||| |
Sbjct 1304228 GACGCTTGTTCCCACCCTGGTCGACATACCGCGCAGTGTTGTTGAAAACCCTGAGCATGG 1304169
Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171
||| ||||||| |||| | || | | || ||| | ||| | | | ||
Sbjct 1304168 GAACAATACCACTGGACCTTCCCTGAGACCCAGTAATGATAGCACCCTTGGCTCTGATAT 1304109
Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231
|||||||||| || || ||||| || | | ||| || ||||| || || ||| | |
Sbjct 1304108 TATGAATATGCAGACCGATACCTCCAGCCGTTTTCGAGATTTGCGCACACGTCTTGAGGG 1304049
Query 156232 TATTGAAAATACCTTCAATAGAATC 156256
||| | | || || || || || ||
Sbjct 1304048 TATCGTAGATTCCGTCGATGGAGTC 1304024
>seq7
Length=1601133
Score = 86.0 bits (94), Expect = 2e-11
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| |||| | ||| | |||||| ||||||||||| || | ||| ||||||||||| |||
Sbjct 756593 GCTCCGTAAGCAATAACACAATCTCGCTCCATTTCTCCCAGACGCAGACCACCATCTCGA 756534
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| | ||| |||| |||||| ||||||||| | |||||| || || |||
Sbjct 756533 GATCGACCTTCGGTAGGCTGTCGAGTGAGAACCGCTCGAGGACCTCGGGGTCGAGCATGC 756474
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
||| || | ||||||||||| || ||||||| | ||| || | ||| |||
Sbjct 756473 ATCTTGTCCATAACCATATGCTTCAGCTTCTGGTAGTAGATGGGGCCAAAGAAAATG 756417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816826835817
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |