Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 145 2e-29 seq2 89.7 2e-12 seq7 86.0 2e-11 >seq4 Length=2565013 Score = 145 bits (160), Expect = 2e-29 Identities = 570/882 (65%), Gaps = 21/882 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||||||| || |||||||| ||| ||||||||| || | ||||||||||| Sbjct 2494682 GTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTACCCAGGTTCTTCTGGTT 2494623 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || || | ||| || || |||||||| || ||| | ||| | || | ||| |||| Sbjct 2494622 GGACTTTCGGTTGCAGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGACTCGGTCTGGCA 2494563 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCTTCCG 155808 ||||||||| | ||| || | ||||| | | | | || | || ||| ||| Sbjct 2494562 GTCCAGAATGTGGTACCACAGCTTCTGGGCAGGGA-TGGTTCGTCGACCTCGGCCCTCCT 2494504 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||| || | | |||||| | | || |||||||| ||| || ||||||| Sbjct 2494503 TCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCACCGTAGACGTCATCGAGGCCAGGGC 2494444 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACA 155927 ||| | |||||| | || | || | | | | | | || |||||||| || | Sbjct 2494443 ACTCGTTGGGGCACATGAGAGTCC-ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGG 2494385 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA--CTCCTCATCGCCGTGAT 155985 || ||| | ||| ||| || || | || | || |||||| | ||||| | Sbjct 2494384 TCGGGAATCCAGAGAGCCAGGAACAGATCTCGGGC--TCGAATCTCCTCCTTACCGTGGT 2494327 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || ||||| |||| || | ||| || |||||||| ||||| |||| Sbjct 2494326 TCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCCAGGTACATGGCAA 2494267 Query 156046 A-ACTACCATT--CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | || | | | | ||||| ||||| || || || ||||| || || ||| |||||| Sbjct 2494266 AGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCGACGTATCGAGCGGTGTTGTTGTAGACAC 2494207 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| || | ||||| ||||| || || ||||||||| ||| | || || | | Sbjct 2494206 GCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGG 2494147 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 || | || || || || || ||||| || | | || || || |||| || Sbjct 2494146 CTCGGATGTTGTGGATGGACAGACCGATACCTCCAGCGGACTTGGAGATGAGAGCACAAG 2494087 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATAGCA 156280 ||| | || | | | || || || || || || || | || |||| | || | || Sbjct 2494086 TCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACA--AGGAAACA 2494029 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 ||| | || || | || ||||| |||||| | || ||||| | || || | || Sbjct 2494028 CGACGACATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAA 2493969 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAAT--CT-TCTCAAGATTAGACCCGTG 156397 ||||| | |||||| || | ||| ||||| ||| || ||| || ||||| Sbjct 2493968 GTACTTTTGAGACATGTAGTTGTAGGTCTC---AATGGCTCGGGCAATGTTGTCGCCGTG 2493912 Query 156398 AATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457 |||| || ||| || | ||| ||| ||||| || ||||| ||| | || | | Sbjct 2493911 GATACCGACAGACACTCGCATGATCATCTGCTGGGGTCGCTCGGCAACAGCGCCGTTGAC 2493852 Query 156458 TCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 |||||| ||||| || || ||||| || || || || || || Sbjct 2493851 TCGCAGCAGGTAGGCTCGCTCCAGGGTCTTGAAGCCAAAGTA 2493810 >seq2 Length=3147093 Score = 89.7 bits (98), Expect = 2e-12 Identities = 216/325 (66%), Gaps = 3/325 (1%) Strand=Plus/Minus Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTA 155994 |||| | || ||||| ||||| ||||| | ||| || | ||||| || ||||| | Sbjct 1304348 CCCACAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCTTCCGCTCCGTGGTTTTTCCGCA 1304289 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA-ACTAC-- 156051 | | | ||| || ||||| | ||| ||||||||||| || ||||| || | Sbjct 1304288 GGTTCAGGAAATCGAATATATCCGCATGCCAGGGCTCCAGATAGATGGCAAACGCTCCGG 1304229 Query 156052 CATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 | | | || |||||||| || |||||||| ||||| || ||||| || | ||||| | Sbjct 1304228 GACGCTTGTTCCCACCCTGGTCGACATACCGCGCAGTGTTGTTGAAAACCCTGAGCATGG 1304169 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 ||| ||||||| |||| | || | | || ||| | ||| | | | || Sbjct 1304168 GAACAATACCACTGGACCTTCCCTGAGACCCAGTAATGATAGCACCCTTGGCTCTGATAT 1304109 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 |||||||||| || || ||||| || | | ||| || ||||| || || ||| | | Sbjct 1304108 TATGAATATGCAGACCGATACCTCCAGCCGTTTTCGAGATTTGCGCACACGTCTTGAGGG 1304049 Query 156232 TATTGAAAATACCTTCAATAGAATC 156256 ||| | | || || || || || || Sbjct 1304048 TATCGTAGATTCCGTCGATGGAGTC 1304024 >seq7 Length=1601133 Score = 86.0 bits (94), Expect = 2e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || |||| | ||| | |||||| ||||||||||| || | ||| ||||||||||| ||| Sbjct 756593 GCTCCGTAAGCAATAACACAATCTCGCTCCATTTCTCCCAGACGCAGACCACCATCTCGA 756534 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | | ||| |||| |||||| ||||||||| | |||||| || || ||| Sbjct 756533 GATCGACCTTCGGTAGGCTGTCGAGTGAGAACCGCTCGAGGACCTCGGGGTCGAGCATGC 756474 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661 ||| || | ||||||||||| || ||||||| | ||| || | ||| ||| Sbjct 756473 ATCTTGTCCATAACCATATGCTTCAGCTTCTGGTAGTAGATGGGGCCAAAGAAAATG 756417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816826835817