Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3 206 4e-47
seq4 154 2e-31
seq1 113 7e-19
seq2 96.9 5e-14
>seq3
Length=2716294
Score = 206 bits (228), Expect = 4e-47
Identities = 247/332 (74%), Gaps = 5/332 (2%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| || ||| | |||||| ||| ||||||||||||||| || |||||
Sbjct 856901 ACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCGCTT 856960
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| ||||||| ||| ||| ||||| |||||||||||||||||||||||
Sbjct 856961 CTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAA 857020
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| | ||||||||| |||| || | | || | | ||||||||| | ||||||
Sbjct 857021 AGCTATCAGCCGCTCGCCAAAGGT---CGACTCGTCGTCGGAGATCCACTTGAGCGCCCA 857077
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578
|| ||||| ||| | | |||| | || ||||||||| || |||| ||| | ||
Sbjct 857078 GTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTC-GCT 857136
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| |||||||||| ||| |||||||| || |||||||| || || ||||||||||| |
Sbjct 857137 CCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTTTCCGAGTGGATGTTCT 857196
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670
| || |||||||||||| || ||||| |||
Sbjct 857197 CCATCATGATCTGGAAGCCGTAGAAGCACTTG 857228
Score = 163 bits (180), Expect = 4e-34
Identities = 204/279 (73%), Gaps = 3/279 (1%)
Strand=Plus/Plus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| ||| |||||||||| || || ||||| ||| || | |||||||||| |
Sbjct 857220 AAGCACTTGGCCTCGGGGACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTC 857279
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
|| || || ||| || || || ||||| || |||||| ||| ||| |||||||||
Sbjct 857280 ACAATACCATCGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCG 857339
Query 796261 TCGCTGAGCGAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317
| | ||||| | |||||| | || |||| |||||| || | |||||||||||||
Sbjct 857340 TTGTTGAGCCGGTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTC 857399
Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAAC 796377
|| || || ||||||||||| |||||||||| ||| ||| ||||| ||||||||||
Sbjct 857400 CAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAG 857459
Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416
|| ||||| || | ||||||| ||||||||||||
Sbjct 857460 AGCACAAACCGGCGGTGGTTCTCCTTGAGCAGCGGCTCG 857498
Score = 140 bits (154), Expect = 5e-27
Identities = 233/330 (71%), Gaps = 10/330 (3%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||| ||||| || ||| ||| ||| |||||| |||||||||||||| | |
Sbjct 856579 TGACGCCGGCCTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCA 856638
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| |||||| | ||| ||||||| | |||| ||| | ||||
Sbjct 856639 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTGCCGA 856698
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | ||||| ||||||||||| || |||||||||||||||||||| ||||||||
Sbjct 856699 GAGCAACCAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCA 856758
Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
| |||| || |||| |||||| | ||| | | ||||| | |||||| | ||||||
Sbjct 856759 TTCCGAGCAG-ACCACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCC 856817
Query 794130 TCGATGATGATCTGCCTGGGCA--CGTC--GGACGACGGCTTGTCGACGAGCATCGTGTA 794185
|||| || | | ||| | || | || ||| | | || |||| | | || | |
Sbjct 856818 TCGACAATCA-CGTCCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTG---CGAGAA 856873
Query 794186 GAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215
|||||| |||||||||||| ||||||||
Sbjct 856874 GAGCAGACAGGCAAAGTCGGTGTGCAGACC 856903
Score = 138 bits (152), Expect = 2e-26
Identities = 223/315 (71%), Gaps = 8/315 (3%)
Strand=Plus/Minus
Query 429508 CGCTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGA 429567
|||| ||| ||| |||| || |||||||||||| | |||||||||| | | |
Sbjct 1819432 CGCTGCAGTACGGCTGGAAGGTGGAGCGCCACCTGATGGACAACGACCCCGTGCTGTTCA 1819373
Query 429568 ACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCG 429627
|||| ||||||||||| || | ||| ||| | |||| |||| | ||||||
Sbjct 1819372 ACCGACAGCCGTCGCTGCATAAAATGTCCATGATGGCCCACCGGGTGCGGGTCATGCCGT 1819313
Query 429628 G-TCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGC 429686
||| |||||||||||||||||| | || ||| ||||||||||||| || |||||
Sbjct 1819312 ACTCG-ACCTTCCGGCTCAACCTGTCGGTCACGTCGCCCTACAACGCCGATTTCGACGGA 1819254
Query 429687 GACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGA--AGTCGC-CCAC 429743
||||| ||||||||||| || || ||||| ||| | | || ||||| ||||| |
Sbjct 1819253 GACGAAATGAACCTGCATGTTCCTCAGTCCGAGGAGACGCGGGCCGAGCTGTCGCAGCTG 1819194
Query 429744 ACCATGGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTC 429803
|||| ||| | || || ||||| || ||| ||||||||||| |||| || |
Sbjct 1819193 TGCATG---GTGCCTCTGCAGATTGTGTCCCCTCAGTCCAACAAGCCCGTCATGGGCATT 1819137
Query 429804 GTGATGGACGCCCTC 429818
||| |||| | |||
Sbjct 1819136 GTGCAGGACACGCTC 1819122
Score = 118 bits (130), Expect = 2e-20
Identities = 389/598 (65%), Gaps = 10/598 (2%)
Strand=Plus/Plus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
||||||||||| ||| || || ||| |||||| ||| ||| |||||| || ||
Sbjct 1435311 AGATCAATCTTAGAGTTGGGATCAGAGGCAGACATCTTACCGCCCTGGGTGAGACCAGGA 1435370
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502
|||| ||||| | || ||| ||||| |||||| | | | |||| ||
Sbjct 1435371 ACCATAGGGTTCATCATGTGTGCTCGCTTCTTGTAGCCGATAGAGGTGAGGTTTTCCTCA 1435430
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
|||| | | |||||||| |||||||| || || ||||| ||||| ||| | |||| |
Sbjct 1435431 GCAAGGACGAAGATCTTTCGCTGGTCAACACCACCGAACTGAGCGTCAACGCCCAGGTAC 1435490
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCC 2411622
| |||||| || |||||||| || ||||| | || | ||| | ||||| | ||
Sbjct 1435491 TCCTCGTCAAGCGCCTGCATCAGAGGGTAAATAAGACCGGAAAGCAGGGGGTTATCGACC 1435550
Query 2411623 ATCTTGACCACCTGGGCGGCGG--CCTTTTGCGCCGTGCCGACGGTCACGCGCGCCGTCA 2411680
||||| || | ||| | | | || ||| ||| ||| | || || | |
Sbjct 1435551 TGTTTGACGACATCGGCACCAGCTCGCTTGGCGTCGT--TGACAGAGACTCGGTTGGAGA 1435608
Query 2411681 GGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTA--ATCGCTGCCGCGCACAAA 2411738
| || || || | ||||| |||||| ||| | | |||| ||| || ||
Sbjct 1435609 GCTTGAACAGATCCATGGTGTACTCGGCGCTCAGCTCGAAGGATCG--GCCAATGACGAA 1435666
Query 2411739 TTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTA 2411798
| || || || ||||| || || |||| || |||||||| |||||||
Sbjct 1435667 TGTCAGCTTGTCGAGAGGGACACCGATAGAACGGAGAATAGCCTTGATCATGTACTCGTA 1435726
Query 2411799 CCAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTG 2411858
| || ||||||| || || ||| || | ||| ||||| ||| ||| ||
Sbjct 1435727 GTACTGGACTCGGTGCTGAACCAGCTCCAGAGGGGCCTTCATGTTGTCAAGGAAGGCATG 1435786
Query 2411859 CACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAA 2411918
|| |||||| | |||||| | ||| ||| || || || |||||||| | ||
Sbjct 1435787 CAAGTCGGCGAGCAGGATCTTGACCTCACAGCCAGCAGCCAGGAAGTCGGCAATCTTGGT 1435846
Query 2411919 GATGGGCACAAAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAAT 2411975
||||||||||||||||| ||| |||||||| || || || || || ||||| || ||
Sbjct 1435847 CATGGGCACAAAGTAGCCACAG-TGGGGCTTTCCAGTTGGTGCAGTTCCCCAGTAGAT 1435903
>seq4
Length=2565013
Score = 154 bits (170), Expect = 2e-31
Identities = 337/505 (67%), Gaps = 15/505 (3%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || |||| ||| |||| || ||||||||||| | ||||||||
Sbjct 2494241 CTGGTCGACGTATCGAGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGA 2494182
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||||| || | ||| || | ||||| || | ||
Sbjct 2494181 GGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGACAGACC 2494122
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || || | |||||||||||| || || | || || || ||||||||||| ||
Sbjct 2494121 GATACCTCCAGCGGACTTGGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAGATGCCGTC 2494062
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| |||||| ||||||||| | || || |||||||| | || || | | || ||
Sbjct 2494061 GATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCC 2494002
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
|| ||| | || || || | || ||| | ||| ||| |||||| | ||||||
Sbjct 2494001 TGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAAGTACTTTTGAGACATGTAGTTGTAGGT 2493942
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
| | | || || | | || |||| || | | |||| | ||
Sbjct 2493941 CTCAATGGCTCGGGCAA-----TGTT----GTCG------CCGTGGATACCGACAGACAC 2493897
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||||||| | ||||||||||||| | || ||| || || ||||||||
Sbjct 2493896 TCGCATGATCATCTGCTGGGGTCGCTCGGCAACAGCGCCGTTGACTCGCAGCAGGTAGGC 2493837
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| ||||||| | ||||||||| ||||| | ||| || |||| | | |||||
Sbjct 2493836 TCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAATGGC 2493777
Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044
||| ||| | ||| || ||||
Sbjct 2493776 TCCGTTGAGCTCGTCCGCGTTCGCC 2493752
>seq1
Length=3339266
Score = 113 bits (124), Expect = 7e-19
Identities = 171/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||| || || ||||| || | ||||||| ||||||| || ||| | |
Sbjct 441823 GTACTTGGCAACAGCTCGAGTACCGTCACCGGTGGCGTGCTTGGCCAGCTCTCCGGGGAG 441764
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || || || |||||||||||||| || | ||| ||| |||| | || |
Sbjct 441763 GATAAGTCGGACAGCGGTCTGGATCTCTCGAGAAGTGATGGTGGACTTCTTGGT-GTAGG 441705
Query 1485591 CGCCAGGCG-GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||||| | | || |||| || |||||||| || |||||||
Sbjct 441704 TGGCAAGCTTGGAGGCCTCGGTGGCAACTCGCTCGAAGATATCGTTGACGAAGGAGTTCA 441645
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| | | | ||||||| || ||||||||| |||||| ||||||||||
Sbjct 441644 TGATGGACATGGCTCGGGTGGAGATACCAGTGTCGGGGTGGGTCTGCTTCAGCACCTTGT 441585
Query 1485710 A 1485710
|
Sbjct 441584 A 441584
Score = 109 bits (120), Expect = 9e-18
Identities = 123/162 (76%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 2035593 TGGGACAAGGCCTTT-TGCGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGC 2035651
|||||| | |||| ||| |||| ||||| | || |||||| | ||||| ||||
Sbjct 2836478 TGGGACTACAACTTTCTGC-AGGTGGACCAGGAGATGCTGTTTGAGATCATCCTGACCGC 2836536
Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711
|| ||||| || |||||||| || || || |||| |||||||||||||||||| | ||
Sbjct 2836537 AAATTACCTGGATATCAAGCCTCTGCTGGACGTGGGCTGCAAGACCGTGGCCAACATGAT 2836596
Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753
|||||||||| | |||||||| || || ||||| |||||
Sbjct 2836597 CAAGGGCAAGACCCCCGAGGAGATTCGACGAACCTTCAACAT 2836638
>seq2
Length=3147093
Score = 96.9 bits (106), Expect = 5e-14
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623
|||||||| ||||||||| || |||||||| |||| |||| | ||||||||||||||
Sbjct 1304661 GGCGACGAGTACTGGACGATTTCCGTGCACAGATTGGACGACTTGATGGTGCCCAGGTTC 1304602
Query 2071624 TGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCG 2071683
||||||||| | |||| | |||||||| |||||| | || | || || |||
Sbjct 1304601 TGCTGGTTGGATTTGGCGTTGCAGCTGTCCTTGTAGAGCATGAACGGTCCTCCGGTTTCG 1304542
Query 2071684 ATCTGCGCCGTGACGATGGCC 2071704
||||| ||||| ||| |||
Sbjct 1304541 ATCTGACTCGTGAGGATCGCC 1304521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916242038642999
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