Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq11 122 6e-23 seq4 116 2e-21 seq8 114 8e-21 >seq11 Length=586936 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | || ||||||||| ||||| ||||| || || | || | || Sbjct 305864 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCC 305805 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| ||||| |||||||| | || | ||||||||||| Sbjct 305804 TCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 305745 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || ||| || || | ||| |||||| Sbjct 305744 TGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTC 305685 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| |||||||||||||| Sbjct 305684 TTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| |||||||| ||||| ||||| || ||| | || | || Sbjct 306092 AGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCC 306033 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| ||||| |||||||| | || | ||||||||||| Sbjct 306032 TCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 305973 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| | |||||| || | ||| |||||| Sbjct 305972 TGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTC 305913 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| || || |||||||| Sbjct 305912 TTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || ||||| |||| |||| ||||||||| ||||| ||||| || || | || | || Sbjct 305076 AGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCC 305017 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||| || ||||| |||||||| | || | ||||||||||| Sbjct 305016 TCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 304958 Score = 86.0 bits (94), Expect = 4e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 34821 CATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34880 |||| || || ||||| || ||||| || ||||| |||||||| | || | ||||||| Sbjct 305249 CATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCCT 305190 Query 34881 TGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 |||| | || || |||||| | || | || || ||| || || | || | Sbjct 305189 TGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGAGTGA 305130 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||| ||||||||||| || || |||||||| Sbjct 305129 TGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093 >seq4 Length=2565013 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | ||| ||||||||| ||||| ||||| || || | || | || Sbjct 110133 CAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTC 110192 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||| |||||||| |||||||| | || | ||||||||||| Sbjct 110193 CTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 110252 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||| || || | ||| ||||| Sbjct 110253 CTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGT 110312 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 ||| || || |||||||| |||||||| |||| Sbjct 110313 CTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344 >seq8 Length=911341 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | ||| ||||||||| ||||| ||||| || ||| | || | || Sbjct 549475 CAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTC 549534 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| ||||| |||||||| | || | ||||||||||| Sbjct 549535 CTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 549594 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||| || |||| ||| || || Sbjct 549595 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 549654 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || |||||||| ||||| |||||||| Sbjct 549655 CTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692637255379