Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 7e-17
seq11 89.7 4e-13
seq8 89.7 4e-13
>seq4
Length=2565013
Score = 102 bits (112), Expect = 7e-17
Identities = 158/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 107557 TGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCG 107616
||||||| |||||||| || | || ||||| ||||| ||| |||| |||| || ||
Sbjct 110344 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 110285
Query 107617 ATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGC 107676
| || | | | | || || ||||| || || || ||| | ||| ||| ||||
Sbjct 110284 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGC 110225
Query 107677 AGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACA 107736
|| |||| |||| || || || ||||| ||||||| | ||| | | ||||||||||
Sbjct 110224 AGCGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAACA 110165
Query 107737 TTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
| || |||||||| || ||||| | || || || | ||||| ||
Sbjct 110164 TCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGACTCCGAGGAGG 110119
>seq11
Length=586936
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || |||||||| || | || || || ||||| ||| |||| ||| | |
Sbjct 305653 ATGCAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCC 305712
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | | || || |||||| || || || || | ||| ||| |||
Sbjct 305713 GATACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 305772
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| ||||||| | || ||||| ||||| ||||||| ||| || | |||||||||
Sbjct 305773 CAGCGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAAC 305832
Query 107736 ATTCAAAAGGAGTCTAC 107752
|| || |||||||||||
Sbjct 305833 ATCCAGAAGGAGTCTAC 305849
>seq8
Length=911341
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 107554 AAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTG 107613
||||||| ||||||||||| || | || || || || || ||| | || |||| ||
Sbjct 549689 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 549630
Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
||| || ||| | | || || ||||| || || || || | ||| ||| |
Sbjct 549629 CCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACC 549570
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
||||| ||||||| | || ||||| ||||| ||||||| | ||| | | |||||||
Sbjct 549569 AGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACA 549510
Query 107734 ACATTCAAAAGGAGTCTAC 107752
|||| || |||||||| ||
Sbjct 549509 ACATCCAGAAGGAGTCCAC 549491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876600686249
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |