Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq8 107 5e-18 seq11 102 2e-16 >seq8 Length=911341 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || ||||| | || ||||| ||| ||| Sbjct 549684 CAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 549625 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || |||||| |||||| || Sbjct 549624 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 549565 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||||||||||||||| |||||| | || || || | || | | || |||||| || Sbjct 549564 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 549505 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||||| ||||| || || ||| || |||| ||| Sbjct 549504 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 549466 >seq11 Length=586936 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || ||||| || ||||| | || || || || || Sbjct 305656 CAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGAT 305715 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || ||| |||||| || Sbjct 305716 ACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 305775 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||||| || |||||| | || || ||| | ||| || |||| |||||| || Sbjct 305776 CGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAACATC 305835 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||||||||||| || || || | |||| ||| Sbjct 305836 CAGAAGGAGTCTACTCTCCATCTGGTCCTCCGACTCCGA 305874 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||| | || || || ||||||||| |||| Sbjct 305896 AAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCTGACACTATCGACAAC 305955 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || ||||||||||| Sbjct 305956 GTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGACTTATCTTC 306015 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || ||| | || | |||| |||||| ||||||| || || Sbjct 306016 GCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAACATCCAGAAGGAATCC 306075 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| |||||||| | |||| ||| Sbjct 306076 ACTCTCCACCTTGTGCTCCGACTCCGA 306102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820179174761