Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 322 7e-82
seq4 154 2e-31
seq1 98.7 1e-14
seq2 89.7 7e-12
>seq3
Length=2716294
Score = 322 bits (356), Expect = 7e-82
Identities = 417/566 (74%), Gaps = 10/566 (2%)
Strand=Plus/Minus
Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774
|||||||||||| || |||| ||| ||||| || |||||||||| |||||
Sbjct 857498 CGAGCCGCTGCTCAAGGAGAACCACCGCCGGTTTGTGCTCTTCCCCATCCAGTACCACGA 857439
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| || || ||||||||||||||| | || |
Sbjct 857438 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATC 857380
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
||||| |||| || | |||||| | ||| | | |||||||||| ||||||
Sbjct 857379 TCGGCAAGGACATGGGCGACTGGGAGAACCGGCTCAACAACGACGAGCGGTTCTTCATCT 857320
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||| || ||||| ||| || || |||||| || ||| ||||||||||| |
Sbjct 857319 CGCACGTGCTGGCCTTCTTT-GCTGCTTCCGATGGTATTGTGAACGAGAACCTGGTGGAG 857261
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || ||||| || | || ||||| | || ||||| |||||||||
Sbjct 857260 CGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATG 857201
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||||||||| ||||| |||||||| ||||||||||| ||| ||||||||||
Sbjct 857200 ATGGAGAACATCCACTCGGAAACGTACTCGCTGCTGATCGACACATACATCAAGGACCCC 857141
Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
||| | ||| |||| || ||||||||| || | || | | | ||| |||||
Sbjct 857140 AAGGAGC-GAACCTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGC 857082
Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190
|||||||||| | ||||||||| | | || | ||||| ||||| ||||||||| |
Sbjct 857081 CGACTGGGCGCTCAAGTGGATCTCCGACGA-CGAGTCGAC-CTTTGGCGAGCGGCTGATA 857024
Query 1456191 GGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249
| ||||||| ||||||||||||||| ||||| ||| ||| | ||||||| ||||||
Sbjct 857023 GCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTC 856964
Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||||||| || ||||||||||| ||
Sbjct 856963 AAGAAGCGAGGTCTCATGCCCGGCCT 856938
Score = 147 bits (162), Expect = 3e-29
Identities = 239/336 (71%), Gaps = 6/336 (2%)
Strand=Plus/Minus
Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACC 1456507
||| ||||| ||||||||||||||||||| | || |||| ||| || || |
Sbjct 856903 GGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCGCACCTCGAGAACCGACCCTCCAAG 856844
Query 1456508 GACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAG 1456567
| | | || | | || ||||||||||| | |||||| | ||||| | | |||
Sbjct 856843 AAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTGACCGAC 856784
Query 1456568 TCGCTGCCG-GTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAAT 1456626
| ||||| |||| || |||| |||||||||| ||||||||||||||||||||| |
Sbjct 856783 GCCCTGCCCTGTGGT-CTGCTCGGAATGAACGCCAA-GCTCATGTGCCAGTACATTGAGT 856726
Query 1456627 TTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAA 1456686
|| ||||||||||| ||||| | || |||||| | ||| |||| | ||||
Sbjct 856725 TT-GTCGCCGACCGTCTGCTGGTTGCTCTCGGCAACTCC-AAGGTCTACAACTCCACCAA 856668
Query 1456687 CCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCG 1456746
||| ||| | |||||| |||||||| | |||||||||||||| |||||| ||
Sbjct 856667 CCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCG 856608
Query 1456747 CGTG-GCGAGTACGCCAAGGCCGGCGTCACCGCCAA 1456781
||| ||| ||| ||||||||||||| |||||
Sbjct 856607 GGTGTCCGACTACCAGAAGGCCGGCGTCATGGCCAA 856572
Score = 123 bits (136), Expect = 4e-22
Identities = 217/312 (70%), Gaps = 3/312 (1%)
Strand=Plus/Plus
Query 1817478 GAGGGCGTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAG 1817537
||| | |||| || | ||| |||| ||||||||||| ||| || ||||| ||| ||
Sbjct 1819122 GAGCGTGTCCTGCACAATGCCCATGACGGGCTTGTTGGACTGAGGGGACACAATCTGCAG 1819181
Query 1817538 -GGCCACGTTCATGGTGTGCGTCACCTCGGCGCGCG-CGTCTCAGACTGGGGCACATGGA 1817595
||| | | || | |||| || |||||| |||| | ||| ||||| || ||||| |
Sbjct 1819182 AGGCACCATGCACAG-CTGCGACAGCTCGGCCCGCGTCTCCTCGGACTGAGGAACATGCA 1819240
Query 1817596 GGTTCATCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACC 1817655
||||||| ||||| ||||| || ||||| ||||||| |||||| | |||||||| ||
Sbjct 1819241 GGTTCATTTCGTCTCCGTCGAAATCGGCGTTGTAGGGCGACGTGACCGACAGGTTGAGCC 1819300
Query 1817656 GCATGGTACGGCCGGGCATGGGCACCACCTTGTGCATGAGCATGGAGCCCATGTGGAGTG 1817715
| | ||| | |||||| | |||| ||| | |||||| | || || |
Sbjct 1819301 GGAAGGTCGAGTACGGCATGACCCGCACCCGGTGGGCCATCATGGACATTTTATGCAGCG 1819360
Query 1817716 AGGGCTGCCGGTTCATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGACTGTCCACC 1817775
| ||||| ||||| | || ||||| |||| | | |||||| ||||| || |||| |
Sbjct 1819361 ACGGCTGTCGGTTGAACAGCACGGGGTCGTTGTCCATCAGGTGGCGCTCCACCTTCCAGC 1819420
Query 1817776 CAATTTGCAGCG 1817787
| |||||||
Sbjct 1819421 CGTACTGCAGCG 1819432
>seq4
Length=2565013
Score = 154 bits (170), Expect = 2e-31
Identities = 214/300 (71%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942
|||||| | |||||| || ||| |||||| || | || || || | || ||
Sbjct 2493942 ACCTACAACTACATGTCTCAAAAGTACTTCACCCACGCTTCCCCTACCCTGTACAACGCA 2494001
Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002
|| || || | || |||| |||||||| || || | ||||||||| ||| || |||
Sbjct 2494002 GGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCCATC 2494061
Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062
|| |||||||| ||||| |||||| || || |||||||||||| | || || || |||
Sbjct 2494062 GACGGCATCTACGACACCCTCAAGACTTGTGCTCTCATCTCCAAGTCCGCTGGAGGTATC 2494121
Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122
||| | || ||||| | || ||| | || ||||| | || || ||||||||
Sbjct 2494122 GGTCTGTCCATCCACAACATCCGAGCCACCGGATCCTACATTGCCGGAACCAACGGTACC 2494181
Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|||||||| | ||||||||||| || || | ||| |||| || || ||||||||||||
Sbjct 2494182 TCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACCGCTCGATACGTCGACCAG 2494241
Score = 105 bits (116), Expect = 1e-16
Identities = 323/496 (65%), Gaps = 14/496 (3%)
Strand=Plus/Plus
Query 262922 TGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCA 262981
|||| |||||| |||| ||||| | |||||| || || | || || ||||| || |||
Sbjct 2495164 TGCGAAACTCGCTGCTGGTGGCCCCCATGCCTACCGCTTCCACTTCTCAGATTCTCGGCT 2495223
Query 262982 ACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCG 263041
|| |||| |||||| | ||| |||||| ||| | || || ||||| | || |
Sbjct 2495224 TCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTGGTG 2495283
Query 263042 ACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGC 263101
| || | ||||||| | ||| ||||| | |||| | | || ||||||| |
Sbjct 2495284 AGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAA-C 2495342
Query 263102 CCGACTTTCGCGA-CCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAG 263160
||| | || ||| || | || | | || || |||||| | | | ||
Sbjct 2495343 GAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACA-- 2495400
Query 263161 GAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTG 263220
| || | || |||||| || | |||||||||||||||| | | | |
Sbjct 2495401 ----TCCCCCAGGAGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCTCAGAAGCGA 2495456
Query 263221 ACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTG 263280
| ||| || ||||| |||||||| | |||| | |||||| |||||| |||||| |
Sbjct 2495457 ATCATCGAGATGGCTGCCGACCGATCCCCCTTCATTGACCAGTCCCAGTCCCTCAACATC 2495516
Query 263281 TACCTCGCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGT 263337
|| || ||||| || || | || |||| || |||||| ||| | |||
Sbjct 2495517 CACATCAAGGACCCCACCATGGGCAAG---CTCACTTCCATGCACTTCTACGGCTGGAAG 2495573
Query 263338 CGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAA 263397
|| |||||||| || |||||||| ||||| ||| | | |||||| | |||| ||
Sbjct 2495574 AAGGGTCTCAAGACCGGTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAG 2495633
Query 263398 TTCACCGTCGATCAGG 263413
|||||| |||| ||||
Sbjct 2495634 TTCACCATCGACCAGG 2495649
>seq1
Length=3339266
Score = 98.7 bits (108), Expect = 1e-14
Identities = 163/231 (71%), Gaps = 12/231 (5%)
Strand=Plus/Plus
Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958
||||| || | |||||||||||||| |||||| |||||| || | | |||
Sbjct 441569 TACTCTTCTTACATCTACAAGGTGCTGAAGCAGACCCACCCCGACACTGGT-----ATC- 441622
Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018
|||| | ||||||| ||||||||||| || |||||||| || |||| || | | |
Sbjct 441623 TCCACCCGAGCCATGTCCATCATGAACTCCTTCGTCAACGATATCTTCGAGCGAGTTGCC 441682
Query 725019 ACCGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075
||||||||| || || || | | || || |||| ||| ||| | || |||
Sbjct 441683 ACCGAGGCC--TCCAAGCTTGCCAC-CTACACCAAGAAGTCCACCATCACTTCTCGAGAG 441739
Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCC 725126
||||||||||| || || || ||| | | ||| || ||||||| |||||||
Sbjct 441740 ATCCAGACCGCTGTCCGACTTATCCTCCCCGGAGAGCTGGCCAAGCACGCC 441790
>seq2
Length=3147093
Score = 89.7 bits (98), Expect = 7e-12
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 262118 CATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAAC 262177
|| ||||| ||||| || | |||| ||||||||||| | |||| | ||||
Sbjct 1304537 CAGATCGAAACCGGAGGACCGTTCATGCTCTACAAGGACAGCTGCAACGCCAAATCCAAC 1304596
Query 262178 CAGCAGAACCTGGGCACCACGACAGAGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCG 262237
||||||||||||||||||| | | |||| |||||||| || |||||||||| |||
Sbjct 1304597 CAGCAGAACCTGGGCACCATCAAGTCGTCCAATCTGTGCACGGAAATCGTCCAGTACTCG 1304656
Query 262238 TCGCCCACCGAGGCAAGTGTGTGCAACCTCTCGAGCGTGGCCCTGCCCAAGTTTGTC 262294
|||||| |||| |||||||| | || || || ||||| ||||||||
Sbjct 1304657 TCGCCCGAAGAGGTGGCAGTGTGCAATTTGGCGTCTGTAGCTTTGCCCGAGTTTGTC 1304713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177807245474642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |