Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq8 118 1e-21 seq11 111 1e-19 seq4 105 6e-18 >seq8 Length=911341 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | |||||| |||| || ||||||||||| || || Sbjct 549496 CTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAA 549555 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| | |||||||||| |||||| ||| | || Sbjct 549556 GATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 549614 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | ||||| || ||||| || | || || | Sbjct 549615 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGA 549674 Query 35724 CAAATATCTGCATT 35737 |||| ||||||||| Sbjct 549675 CAAAAATCTGCATT 549688 >seq11 Length=586936 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||| | ||| |||||| || |||||||| |||| || ||||| |||| || Sbjct 305861 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 305802 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| || || || | ||||||||||||| |||| | |||||||||| Sbjct 305801 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 305742 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | |||| | | || ||| || || ||||| | ||||| || || Sbjct 305741 ATCTTGGACTTGA-CGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTT 305683 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || || ||||| |||||||| Sbjct 305682 TCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| |||| | |||||| |||| || ||||||||||| || || Sbjct 306071 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAG 306012 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| || | | |||||||||| |||||| ||| | ||| Sbjct 306011 ATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 305953 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || || ||||| | ||||| || || || || | || ||||| Sbjct 305952 GTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCAC 305893 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 305892 GAAAATCTGCAT 305881 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||||| |||| || ||||||||||| || || Sbjct 305056 CTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAA 304997 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||||| |||| | |||||||||| ||||| Sbjct 304996 AATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTT 304949 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 35573 GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACG 35632 ||||| | || || ||||||||||| || || || | ||||||||||||| |||| Sbjct 305256 GTTCGGCCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATA 305197 Query 35633 CTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTC 35691 | |||||||||| |||||| ||| | |||| | | |||||| || || ||||| Sbjct 305196 CCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAGGACTCAACCTC 305138 Query 35692 CACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| || || || || | || ||||| || |||||||| Sbjct 305137 GAGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093 >seq4 Length=2565013 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||||| |||| || |||||||| || || || Sbjct 110154 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 110213 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 110214 AATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 110272 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | ||||| || || || || | || || | Sbjct 110273 TGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGA 110332 Query 35724 CAAATATCTGCA 35735 |||| || |||| Sbjct 110333 CAAAGATTTGCA 110344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793368968280