Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 179 5e-40
seq3 122 1e-22
>seq4
Length=2565013
Score = 179 bits (198), Expect = 5e-40
Identities = 470/712 (66%), Gaps = 4/712 (1%)
Strand=Plus/Minus
Query 69508 TATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACAC 69567
|| ||| | | ||| || || || | || ||||| | ||||| || || || || |||
Sbjct 2494489 TACAGCTGCTTGAACTCGTCACCGTAGACGTCATCGAGGCCAGGGCACTCGTTGGGGCAC 2494430
Query 69568 ATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGA 69627
|| | | |||| | | | | || ||||| | ||| || || ||||||||||| |||
Sbjct 2494429 ATGAGAGTCCACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGAATCCAGAGA 2494370
Query 69628 GCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGA 69687
|| | || ||||||| || || | | || || || || || ||| || |||
Sbjct 2494369 GCCAGGAACAGATCTCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAG 2494310
Query 69688 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTA 69747
||||| | | ||| ||||| || || || || || || | | |||| ||||| ||
Sbjct 2494309 AACTCGAAGACGTCATCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTG 2494250
Query 69748 TTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATA 69807
|| |||||||| || | ||||| || ||||| || ||||| | |||||| || | |||
Sbjct 2494249 TTGCCTCCCTGGTCGACGTATCGAGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATA 2494190
Query 69808 CCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATA 69867
|| || || |||| || ||||| | ||| || ||| | || || || || ||
Sbjct 2494189 CCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGGCTCGGATGTTGTGGATG 2494130
Query 69868 GATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATAT 69927
|| ||||| || ||||| || || ||||| ||||||||| || | ||||| ||
Sbjct 2494129 GACAGACCGATACCTCCAGCGGACTTGGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAG 2494070
Query 69928 ATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGT 69987
|| || || ||| || || ||||||| | ||| ||||| ||||| || | ||
Sbjct 2494069 ATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGG 2494010
Query 69988 ATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAG 70046
||||| || || | | ||||| || ||||| ||||| | |||| ||| | | ||
Sbjct 2494009 GGGGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAAGTACTTTTGAGACATGTAG 2493950
Query 70047 ATTGTATGTTTCAATAGCTGATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCA 70105
||||| || ||||| ||| | || | | | | || || || | | || ||||
Sbjct 2493949 -TTGTAGGTCTCAATGGCTCGGGCAATGTTGTCGCCG-TGGATACCGACAGACACTCGCA 2493892
Query 70106 TCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTT 70165
| | ||| ||||| ||||| || | || | | || |||||| | | |
Sbjct 2493891 TGATCATCTGCTGGGGTCGCTCGGCAACAGCGCCGTTGACTCGCAGCAGGTAGGCTCGCT 2493832
Query 70166 CCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
|||| || || || ||||| |||||||| | ||||||| ||||| | |||
Sbjct 2493831 CCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAAT 2493780
>seq3
Length=2716294
Score = 122 bits (134), Expect = 1e-22
Identities = 381/587 (65%), Gaps = 6/587 (1%)
Strand=Plus/Plus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
||||| ||||| || || ||||| |||| || | ||||| || || |||||
Sbjct 856881 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 856940
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
|| ||||| ||||| ||||| |||||||| || |||| || || || || || ||||||
Sbjct 856941 CCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAG 857000
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GT 39793
||||| || || || ||||| || | || | ||| || | | | || | |
Sbjct 857001 ATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAG 857060
Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853
|||||||| | ||||| || || |||||||| | || || || || || || || ||
Sbjct 857061 ATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTG 857120
Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913
|| || || | || | || || | ||||| || || | ||| ||| ||
Sbjct 857121 AACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTT 857180
Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973
|| || |||||||| || ||| ||||| || ||||| || || | || || | |
Sbjct 857181 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACC 857240
Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033
|| ||||| | |||| ||| ||| || || ||||| || ||||| ||| |||
Sbjct 857241 TGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCA 857300
Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTG-TCAATTTATTCCAG 40090
|| || |||| || || || || | || ||| | || | || | ||||
Sbjct 857301 AAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAG 857360
Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150
|| || || || | ||| | || || || ||||| || || ||||| |||||
Sbjct 857361 TCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTC 857420
Query 40151 TTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|||||||| | ||| || || | || || || || || | |||||
Sbjct 857421 TTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 857467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908447959240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |