Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq1 87.8 2e-12 >seq2 Length=3147093 Score = 107 bits (118), Expect = 2e-18 Identities = 220/320 (69%), Gaps = 9/320 (3%) Strand=Plus/Minus Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703 ||| || |||||||| |||| ||||||||||| || ||||| ||||| ||||| ||| | Sbjct 1304377 TTCCACCCGCTTCATGAACAGGTCCGGCACCCACAATGCGTAGAACAGGTCTCTTGCTCT 1304318 Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763 |||||||| | || |||| || || | || || || || ||||||||||| Sbjct 1304317 GTTCTCTTCCGCTCCGTGGTTTTTCCGCAGGTTCAGGAAATCGAATATATCCGCATGCCA 1304258 Query 131764 GGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACG 131820 ||| |||| ||| | || | || || ||| || || || || | |||| || Sbjct 1304257 GGGCTCCAGATAGATGGCAAACGCTCCGGGACGCTTGTTCCCACCCTGGTCGACATACCG 1304198 Query 131821 AACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCT 131880 | |||||||| | || | | |||||| | | ||| ||| |||| | | | Sbjct 1304197 CGCAGTGTTGTTGAAAACCCTGAGCATGGGAACAATACCACTGGACCTTCCCTGAGACCC 1304138 Query 131881 CTTAATG-TAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCG 131938 ||||| |||| || ||||||||||| || |||| | || || |||||||| |||| Sbjct 1304137 AGTAATGATAGC-ACCCTTGGCTCTGATATTATGAATATGCAGACCGATACCTCCAGCCG 1304079 Query 131939 TATTTAGAGATTAGTGCGCA 131958 | ||| |||||| |||||| Sbjct 1304078 T-TTTCGAGATT--TGCGCA 1304062 >seq1 Length=3339266 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 96897 GGGTTTCATGTACACGAGTTTGGCGACACGAGCAACGGCTGCACTTCGGCCGGCGAACAT 96956 || || || || ||||||||||| |||| | ||||||||||||||| |||||| || Sbjct 1310257 GGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCCGGCCCCCAC 1310316 Query 96957 TTCAA-CCCTACATTGCAAAATCACGGCGCACCCAGCGCCATTGAACGCCACGTTGGTGA 97015 ||||| |||| || | | || ||||| || |||| || | || || ||||||||||| Sbjct 1310317 TTCAACCCCTTCA-AGAAGAACCACGGTGCCCCCACCGACTCCGAGCGACACGTTGGTGA 1310375 Query 97016 TCTGGGCAACGT 97027 || || ||||| Sbjct 1310376 CCTCGGAAACGT 1310387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934187665592