Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
seq1 87.8 2e-12
>seq2
Length=3147093
Score = 107 bits (118), Expect = 2e-18
Identities = 220/320 (69%), Gaps = 9/320 (3%)
Strand=Plus/Minus
Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703
||| || |||||||| |||| ||||||||||| || ||||| ||||| ||||| ||| |
Sbjct 1304377 TTCCACCCGCTTCATGAACAGGTCCGGCACCCACAATGCGTAGAACAGGTCTCTTGCTCT 1304318
Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763
|||||||| | || |||| || || | || || || || |||||||||||
Sbjct 1304317 GTTCTCTTCCGCTCCGTGGTTTTTCCGCAGGTTCAGGAAATCGAATATATCCGCATGCCA 1304258
Query 131764 GGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACG 131820
||| |||| ||| | || | || || ||| || || || || | |||| ||
Sbjct 1304257 GGGCTCCAGATAGATGGCAAACGCTCCGGGACGCTTGTTCCCACCCTGGTCGACATACCG 1304198
Query 131821 AACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCT 131880
| |||||||| | || | | |||||| | | ||| ||| |||| | | |
Sbjct 1304197 CGCAGTGTTGTTGAAAACCCTGAGCATGGGAACAATACCACTGGACCTTCCCTGAGACCC 1304138
Query 131881 CTTAATG-TAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCG 131938
||||| |||| || ||||||||||| || |||| | || || |||||||| ||||
Sbjct 1304137 AGTAATGATAGC-ACCCTTGGCTCTGATATTATGAATATGCAGACCGATACCTCCAGCCG 1304079
Query 131939 TATTTAGAGATTAGTGCGCA 131958
| ||| |||||| ||||||
Sbjct 1304078 T-TTTCGAGATT--TGCGCA 1304062
>seq1
Length=3339266
Score = 87.8 bits (96), Expect = 2e-12
Identities = 100/132 (76%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 96897 GGGTTTCATGTACACGAGTTTGGCGACACGAGCAACGGCTGCACTTCGGCCGGCGAACAT 96956
|| || || || ||||||||||| |||| | ||||||||||||||| |||||| ||
Sbjct 1310257 GGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCCGGCCCCCAC 1310316
Query 96957 TTCAA-CCCTACATTGCAAAATCACGGCGCACCCAGCGCCATTGAACGCCACGTTGGTGA 97015
||||| |||| || | | || ||||| || |||| || | || || |||||||||||
Sbjct 1310317 TTCAACCCCTTCA-AGAAGAACCACGGTGCCCCCACCGACTCCGAGCGACACGTTGGTGA 1310375
Query 97016 TCTGGGCAACGT 97027
|| || |||||
Sbjct 1310376 CCTCGGAAACGT 1310387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934187665592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |