Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 122 3e-22 >seq3 Length=2716294 Score = 122 bits (134), Expect = 3e-22 Identities = 401/608 (66%), Gaps = 19/608 (3%) Strand=Plus/Minus Query 443271 CGGTTCGTCTTGTTCCCCGTTCAGCATCCCGACATCTACGACATGTACAA-ACGACAAGT 443329 ||||| || | |||||| | ||| | | ||| |||| | |||||||| | | | | Sbjct 857470 CGGTTTGTGCTCTTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCC-GA 857412 Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389 ||| || |||||| ||||||||||||||| ||||||| ||| ||| ||| | | Sbjct 857411 GGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGCGACTGGGAGAA 857352 Query 443390 ACGACTATCTAGCCATGAACGCGATTTCTTCAAAT-GCATCT--TGGCCTTCTTTGCACC 443446 || || | | | || || ||||||| | ||| | ||||||||||||| | Sbjct 857351 CCGGCTCAACAACGACGAGCGG---TTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGC 857295 Query 443447 GAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACAC 443506 ||| ||||| || ||||| |||||| ||| |||| || ||| | | | Sbjct 857294 TTCCGATGGTATTGTGAACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTGCAGGTCCC 857235 Query 443507 CGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTA 443566 ||||||| | |||||||| ||||| | ||||||||||| ||| | || || Sbjct 857234 CGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTA 857175 Query 443567 CAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCAT 443625 | | | ||||| | ||| || || || || | | |||| || | || ||| Sbjct 857174 CTCGCTGCTGATCGACACA-TACATC--AAGGACCCCAAGGAGCGAACCTACCTGTTCAA 857118 Query 443626 CGT--TCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CTC 443681 || || ||||| || |||||| | ||| | |||||| ||||| ||| Sbjct 857117 CGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTC 857058 Query 443682 GAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTG 443741 |||| | || | ||| | |||||| || | |||||||| | ||||| || | Sbjct 857057 CGACGACGAG-TCG-ACCTTTGGCGAGCGGCTGATAGCTTTTGCCGCCGTCGAGGGCATC 857000 Query 443742 TTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGG 443801 || || |||| | || ||||||||||||||| | || ||||| || || |||| ||| Sbjct 856999 TTCTTCTCCGGCT-CGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGG 856941 Query 443802 TCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 || ||||| ||||| || ||| || ||||||||| |||| |||||| ||||| Sbjct 856940 CCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTG 856881 Query 443862 TCTTCTCT 443869 ||| |||| Sbjct 856880 TCTGCTCT 856873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335165627245