Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 2e-31
seq2 105 8e-18
>seq3
Length=2716294
Score = 150 bits (166), Expect = 2e-31
Identities = 350/520 (67%), Gaps = 16/520 (3%)
Strand=Plus/Plus
Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796
|||||||||||||||||||| ||||| ||| ||| ||| |||||||| || || ||
Sbjct 856605 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 856664
Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTG--GC--ACTCCAATCTGTTTGAGGAGACGATCC 129850
||||| | ||||| | | ||| | || | ||| | || ||||| ||
Sbjct 856665 GGGTTGGTGGAGTTGTAGACCTTGGAGTTGCCGAGAGCAACC------AGCAGACGGTCG 856718
Query 129851 GAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGG 129910
| ||| |||||||||||| |||| || || |||||| |||| || ||| ||
Sbjct 856719 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGACCACAGGGC 856778
Query 129911 AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATG 129970
|| ||||| | |||| ||| ||| || | || || || | | | | | |
Sbjct 856779 AGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGTCCTCGACA 856838
Query 129971 GTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCCTGGTG 130029
||| | || |||| || | | | || | |||||| |||||| || |||
Sbjct 856839 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTGTG 856897
Query 130030 GAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCG 130089
||||||||||| ||||||||||| || || |||||| || || ||||||||||| ||
Sbjct 856898 CAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 856957
Query 130090 CTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGC 130149
|||||| | |||||| || | || ||||| ||||||||||| ||||| || ||
Sbjct 856958 CTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGC 857017
Query 130150 GAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCC 130208
|| || | || ||||| |||||| || | | || | | |||||| | |||||
Sbjct 857018 AAAAGCTATCAGCCGCTCGCCAAAGG-TCGACTCGTCGTCGGAGATCCACTTGAGCGCCC 857076
Query 130209 ACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248
| | ||||| |||| ||| || |||| ||||| ||| ||
Sbjct 857077 AGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116
>seq2
Length=3147093
Score = 105 bits (116), Expect = 8e-18
Identities = 451/708 (64%), Gaps = 11/708 (2%)
Strand=Plus/Minus
Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823
||||||||||||| || || ||| |||||||||| ||||| || || || || | |
Sbjct 1304643 ATTTCCGTGCACAGATTGGACGACTTGATGGTGCCCAGGTTCTGCTGGTTGGATTTGGCG 1304584
Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883
|| || |||||||| |||||| | || || || || | || | |||| ||
Sbjct 1304583 TTGCAGCTGTCCTTGTAGAGCATGAACGGTCCTCCGGTTTCGATCTGACTCGTGAGGATC 1304524
Query 118884 GCCTTCCAGACATCGGCAGC-TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942
||||| | | || || | | | | ||||||| |||| || ||||||||
Sbjct 1304523 GCCTTGAACAGCTCCTGCGCGTTGATCTG-GGCGTTGAACAAGCCCTTTTTCTCGTACTC 1304465
Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002
||| ||||| || | ||| | ||| ||||| || ||| | | |||
Sbjct 1304464 CTCGTACTTTTGCTCAAAGTCCGCTCCCCACACGTCTTCCAGCCCAGGGGCCCTCTTTGG 1304405
Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062
||||| | ||||| | | || || |||||||||||||| ||||| || | |||
Sbjct 1304404 ACAGAACAAGGACCACTTTTCGCCTCTTTCCACCCGCTTCATGAACAGGTCCGGCACCCA 1304345
Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122
| || |||| || || | | ||||| | || || || |||| |
Sbjct 1304344 CAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCTTCCGCTCCGTGGTTTTTCCGCAGGTT 1304285
Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182
|| || || | |||||||| ||||| || ||||| || | || | | || |||
Sbjct 1304284 CAGGAAATCGAATATATCCGCATGCCAGGGCTCCAGATAGATGGCAAACGCTCCGGGACG 1304225
Query 119183 ACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239
||| |||||| ||||||| ||||||| ||| || || | ||||| ||||
Sbjct 1304224 CTTGTTCCCACCCTGGTCGACATACCGCGCAGTGTTGTTGAAAACCCTGAGCATGGGAAC 1304165
Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299
|||||| ||| || | | ||| ||| || |||||||||| || ||
Sbjct 1304164 AATACCACTGGACCTTCCCTGAGACCCAGTAATGATAGCACCCTTGGCTCTGATATTATG 1304105
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
|| |||| ||| ||||| || ||| || ||||||||||| ||| | |||| | |
Sbjct 1304104 AATATGCAGACCGATACCTCCAGCCGTTTTCGAGATTTGCGCACACGTCTTGAGGGTATC 1304045
Query 119360 GTAGATCCCATCGATCGAGTC---ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416
|||||| || ||||| ||||| || || || | || || ||| ||||| |||
Sbjct 1304044 GTAGATTCCGTCGATGGAGTCGGATGCCATA---GCCACCAGAAAACAGGACGACAGTTG 1303988
Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464
| ||| ||||| || ||||| || || || | ||||| ||||
Sbjct 1303987 TCCCTGGGGAGTACCGGCATTGAAAAGCGTGGGAGAAGCGTGTGTGAA 1303940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434883051960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |