Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 262 5e-65 seq3 131 2e-25 >seq4 Length=2565013 Score = 262 bits (290), Expect = 5e-65 Identities = 1148/1790 (64%), Gaps = 65/1790 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||| ||||||| ||| | ||||||| || || || |||||| | | Sbjct 2493876 CCCCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACAACATTGCCCGAGCC 2493935 Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | ||||| ||| ||| |||| ||||| | || ||||| | Sbjct 2493936 ATTGAGACCTACAACTACATGTCTCAAAAGTAC-TTCACCCACGCTTCCCCTACCCTGTA 2493994 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || ||||| ||||| || |||||| || || ||||| || Sbjct 2493995 CAACGCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGA 2494054 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| |||| ||||| | || || | | ||||| | ||||| |||| ||||| Sbjct 2494055 CTCCATCGACGGCATCTACGACACCCTCAAGACTTGTGCTCTCATCTCCAAGTCCGCTGG 2494114 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||| || || |||||| | | |||||| ||| ||| || || || Sbjct 2494115 AGGTATCGGTCTGTCCATCCACAACATCCGAGCCACCGGATCCTACATTGCCGGAACCAA 2494174 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | ||||| | || ||||| || || | ||| ||| || || || || Sbjct 2494175 CGGTACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACCGCTCGATACGT 2494234 Query 104581 AAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | || ||| | | | ||| ||| | | || | || || ||||| |||| Sbjct 2494235 CGACCA----GGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGC 2494290 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 ||| || || | |||||| ||| |||| ||||| ||| | |||||| || Sbjct 2494291 ACGATGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATTCGAG 2494350 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| ||||| ||| |||||||||||||| || || |||||| || |||| ||| ||| Sbjct 2494351 CCCGAGATCTGTTCCTGGCTCTCTGGATTCCCGACCTGTTCATGGAGCGAGTCGAGCAGA 2494410 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT---GG 104810 | | | ||| ||||| | || || || || ||||| || ||||| ||| | Sbjct 2494411 ACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCT---CGATGACGTCTACG 2494467 Query 104811 GTGAGGAGTTTGAAGC-CCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 |||| ||| || |||| || ||| |||||| |||||| || ||| |||| Sbjct 2494468 GTGACGAG-TTCAAGCAGCTGTACGAGCAGTACG----AGAAGGAGGGCCGAGGTCGAC- 2494521 Query 104870 GTGCCA--GCTGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 | ||| ||||| || | ||||| | ||||| | | || |||||| | |||| Sbjct 2494522 GAACCATCCCTGCCCAGAAGCTGTGGTACCACATTCTGGACTGCCAGACCGAGTCCGGTA 2494581 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 || | |||||| ||||| |||||||| |||| |||| || || ||||| ||||| Sbjct 2494582 ACCCCTTCATGCTCTACAAGGACGCCTGCAACCGAAAGTCCAACCAGAAGAACCTGGGTA 2494641 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 |||||| |||||| || ||| || || | || | | |||||| | Sbjct 2494642 CCATCAAGTCTTCCAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCTGATGAGGTCG 2494701 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCA---GAGACAAAGA 105101 |||| || ||||| || || |||||||| |||| | ||| || | ||||| || Sbjct 2494702 CTGTCTGCAACCTGGCTTCCATCGCTCTGCCCACCTTTGTCACTCGAGACGAGACCAACT 2494761 Query 105102 CATT---TGATTATGAAAAACTCCACGAAGTTACGAA---AACTGTCACCAAAAACCTAA 105155 | || || | | || || ||||| || | || | ||| |||||| | Sbjct 2494762 CCTTCTACGACTTCAAGAAGCTGCACGATATTGCCAAGGTGATTGT---GCGAAACCTCA 2494818 Query 105156 ACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGA 105212 || | ||||| |||| | ||||| || |||| || || || || ||| Sbjct 2494819 ACGCCATCATTGACCGAAACTACTACCCTGTCCCTGAG---GCCAAGAAGTCCAACATGC 2494875 Query 105213 GACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCC 105272 ||||||| || |||| ||| ||||| |||||||| || ||| ||||| || | Sbjct 2494876 GACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCATGGCCCTCCGAC 2494935 Query 105273 ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATC 105332 | || || ||||| || || ||| | |||| | || || |||||||| || | Sbjct 2494936 TGCCCTTCGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACC 2494995 Query 105333 ACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 105392 ||| || ||||||| || ||| |||| | || ||| | || || ||||| Sbjct 2494996 ACGGTGCCGTTGAGGCTTCTTACGAGATGGCCCTTGAGGACGGTGCTTACGAGACCTTCC 2495055 Query 105393 AGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA----GAC 105447 |||| ||||| || || |||||| | || || ||||| ||| |||| |||| | Sbjct 2495056 AGGGCTCTCCTGCCTC-CAAGGGTGACCTGCAGTTTGACCTGT-GGAACGTGACTCCCTC 2495113 Query 105448 CAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 105507 | |||| || || ||||| | |||||||| |||| | ||| || | || || Sbjct 2495114 CGAGCT---CTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGACCGGAATGCGAAA 2495170 Query 105508 CAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 105567 | || || |||| || ||||| || || ||||| | || || | || || || Sbjct 2495171 CTCGCTGCTGGTGGCCCCCATGCCTACCGCTTCCACTTCTCAGATTCTCGGCTTCAACGA 2495230 Query 105568 ATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTG 105626 ||||| || |||||||| | ||||| || ||| || || || || || ||||| Sbjct 2495231 GTGCTTCGAGCCCTACACCTCCAACATTTACTCT-CGACGAGTGCTTGCTGGTGAGTTCC 2495289 Query 105627 TGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATA 105686 |||||||||| || | | ||||| ||| ||||||| ||| | || | Sbjct 2495290 AGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAACGAGACCA 2495349 Query 105687 TGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATG 105746 ||||| | | || ||| | || ||| | || || || | || || | | Sbjct 2495350 TGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGG 2495409 Query 105747 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGG 105806 | || ||| | ||||| || || ||||| || |||| |||| || |||| Sbjct 2495410 AGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCTCAGAAGCGAATCATCGAGATGG 2495469 Query 105807 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAG 105864 | || || || | ||||||||| | |||| ||| | || || ||| | Sbjct 2495470 CTGCCGACCGATCCCCCTTCATTGACC--AGTCCCAGTCCCTCAACATCCACATCAAGGA 2495527 Query 105865 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924 || || ||| ||||||| |||| |||||| | ||| | ||||||||||||||||| || Sbjct 2495528 CCCCACCATGGGCAAGCTCACTTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGAC 2495587 Query 105925 GGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 || ||||| ||||| ||| | | ||| || ||| || ||||||| Sbjct 2495588 CGGTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCA 2495637 >seq3 Length=2716294 Score = 131 bits (144), Expect = 2e-25 Identities = 171/235 (73%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| | || | || || || | ||||| || || ||||| | |||||| | | Sbjct 857116 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATC--T 857059 Query 94783 ACAAAGTCGCGTT--CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 94840 | | | || || |||||| ||||| || | || ||||| || ||||| |||| Sbjct 857058 CCGACGACGAGTCGACCTTTGGCGAGCGGCTGATAGCTTTTGCCGCCGTCGAGGGCATCT 856999 Query 94841 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900 ||||||| || || ||| | | || | |||||||||||||||||||||||||| || | Sbjct 856998 TCTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCC 856939 Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||||||||||||||| ||||| || |||||||| || ||| || ||||| Sbjct 856938 TCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGC 856884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260501078840