Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4 307 1e-78
seq2 156 5e-33
>seq4
Length=2565013
Score = 307 bits (340), Expect = 1e-78
Identities = 432/603 (72%), Gaps = 4/603 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || | | ||||||||||| ||| || | || | | |||||| |||
Sbjct 2493889 TCATGCGAGTGTCTGTCGGTATCCACGGCGACAACATTGCCCGAGCCATTGAGACCTACA 2493948
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
||| ||| ||||||||||| || ||||| | || ||||||| |||||| || ||
Sbjct 2493949 ACTACATGTCTCAAAAGTACTTCACCCACGCTTCCCCTACCCTGTACAACGCAGGAACCC 2494008
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| || ||||||||| || ||||| || |||||||| ||||| ||||||||||
Sbjct 2494009 CCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCCATCGACGGCA 2494068
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT-- 53430
||||||| || |||||| ||||| | ||||||||||| | || ||||||||| |
Sbjct 2494069 TCTACGACACCCTCAAGACTTGTGCTCTCATCTCCAAGTCCGCTGGAGGTATCGGTCTGT 2494128
Query 53431 CCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
||| | | | ||| |||| || | ||| | || || || ||||| | || |
Sbjct 2494129 CCA-TCCAC-AACATCCGAGCCACCGGATCCTACATTGCCGGAACCAACGGTACCTCCAA 2494186
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| |||||||| ||||| || |||| ||||||||| || || |||||| ||||||| ||
Sbjct 2494187 CGGTATCGTGCCCATGCTGCGTGTCTACAACAACACCGCTCGATACGTCGACCAGGGAGG 2494246
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
||||| || | || ||||| ||||| ||||| ||||||| ||| | | ||
Sbjct 2494247 CAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGCACGATGACGTCTTCGA 2494306
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670
||| ||||||||| ||| || ||| | || ||||| || ||| || |||||
Sbjct 2494307 GTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATTCGAGCCCGAGATCTGTTCCT 2494366
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
||||| |||||||| ||||| |||||| | || ||| || ||| |||||| ||
Sbjct 2494367 GGCTCTCTGGATTCCCGACCTGTTCATGGAGCGAGTCGAGCAGAACGCCGAGTGGACTCT 2494426
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790
|||||||| ||||||||||| |||||| | | ||||||||||| ||||| || || |
Sbjct 2494427 CATGTGCCCCAACGAGTGCCCTGGCCTCGATGACGTCTACGGTGACGAGTTCAAGCAGCT 2494486
Query 53791 GTA 53793
|||
Sbjct 2494487 GTA 2494489
Score = 158 bits (174), Expect = 1e-33
Identities = 304/445 (68%), Gaps = 5/445 (1%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|| ||||| ||||| ||||| || ||||| ||||| || || ||||||| | ||| |
Sbjct 2495166 CGAAACTCGCTGCTGGTGGCCCCCATGCCTACCGCTTCCACTTCTCAGATTCTCGGCTTC 2495225
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| ||||||| ||| || || || || ||||||
Sbjct 2495226 AACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTGGTGAG 2495285
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| || ||||| || ||||||||||| || | ||||||| |
Sbjct 2495286 TTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAACGAG 2495345
Query 55664 CAGATCAAGA-CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG---AGATTCC 55719
|| |||| | || || ||| || || ||||| ||||| | | || ||
Sbjct 2495346 ACCATGAAGAACCGA-ATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCC 2495404
Query 55720 TCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGA 55779
| | ||||||| | ||| ||| |||||||||||| | |||||| | | || ||
Sbjct 2495405 CCAGGAGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCTCAGAAGCGAATCATCGA 2495464
Query 55780 CATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGA 55839
||| ||| || || | | ||| |||||||||||||| || |||||| ||| |
Sbjct 2495465 GATGGCTGCCGACCGATCCCCCTTCATTGACCAGTCCCAGTCCCTCAACATCCACATCAA 2495524
Query 55840 GAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAA 55899
| | || | ||| |||| | | || |||||||| ||||| ||||||||||| |||||
Sbjct 2495525 GGACCCCACCATGGGCAAGCTCACTTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAA 2495584
Query 55900 GACGGGTATGTACTATCTGCGGACC 55924
||| ||||||||||| ||||| |||
Sbjct 2495585 GACCGGTATGTACTACCTGCGAACC 2495609
>seq2
Length=3147093
Score = 156 bits (172), Expect = 5e-33
Identities = 454/689 (66%), Gaps = 10/689 (1%)
Strand=Plus/Plus
Query 53273 TTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGC 53332
|| || ||||| | || || || ||||| || ||||| || || ||||| |
Sbjct 1303940 TTCACACACGCTTCTCCCACGCTTTTCAATGCCGGTACTCCCCAGGGACAACTGTCGTCC 1303999
Query 53333 TGCTTCCTGGTGGCGATGAAGGAT--GACTCGATCGACGGCATCTACGAGACGCTCAAGG 53390
|| || |||||||| ||| | || ||||| |||||||| |||||||| || ||||||
Sbjct 1304000 TGTTTTCTGGTGGCTATG--GCATCCGACTCCATCGACGGAATCTACGATACCCTCAAGA 1304057
Query 53391 AGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGTCCGT 53449
|||||| || ||||| || | | || ||||||||| | || | || || || |
Sbjct 1304058 CGTGTGCGCAAATCTCGAAAACGGCTGGAGGTATCGGTCTGCA-TATTCATAATATCAGA 1304116
Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509
|| || || | || | ||| | | || || ||| || || || ||||||
Sbjct 1304117 GCCAAGGGTGCTATCATTACTGGGTCTCAGGGAAGGTCCAGTGGTATTGTTCCCATGCTC 1304176
Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569
| || ||||||||||| || ||||| ||| |||||||||| ||||| || ||
Sbjct 1304177 AGGGTTTTCAACAACACTGCGCGGTATGTCGACCAGGGTGGGAACAAGCGTCCCGGAGCG 1304236
Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629
|| |||||||| || ||||| ||||| || || || | || || || | |||||
Sbjct 1304237 TTTGCCATCTATCTGGAGCCCTGGCATGCGGATATATTCGATTTCCTGAACCTGCGGAAA 1304296
Query 53630 AATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGA 53688
|| || || | ||||||| | | |||||||| ||| || ||||| | |||||
Sbjct 1304297 AACCACGGAGCGGAAGAGAACAGAGCAAGAGACCTGTTCTAC-GCATTGTGGGTGCCGGA 1304355
Query 53689 CCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTG 53748
||| |||||| | |||||| | | ||| |||||| | || | || || || ||| |
Sbjct 1304356 CCTGTTCATGAAGCGGGTGGAAAGAGGCGAAAAGTGGTCCTTGTTCTGTCC-AAAGAGGG 1304414
Query 53749 CCCC-GGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAG 53807
|||| || || | | || | || | ||| ||| | | | ||| | |||||
Sbjct 1304415 CCCCTGGGCTGGAAGACGTGTGGGGAGCGGACTTTGAGCAAAAGTACGAGGAGTACGAGA 1304474
Query 53808 TTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGA 53867
||||| | ||| || |||| |||| ||| | | | || ||||||| ||
Sbjct 1304475 AAAAGGGCTTGTTCAACGCCCAGATCAACGCGCAGGAGCTGTTCAAGGCGATCCTCACGA 1304534
Query 53868 GCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCA 53927
| ||| | || || ||| |||| |||| ||||||||| ||||| || ||
Sbjct 1304535 GTCAGATCGAAACCGGAGGACCGTTCATGCTCTACAAGGACAGCTGCAACGCCAAATCCA 1304594
Query 53928 ACCAGAAGAACATCGGCGTCATCAAATCG 53956
||||| ||||| | ||| |||||| |||
Sbjct 1304595 ACCAGCAGAACCTGGGCACCATCAAGTCG 1304623
Score = 120 bits (132), Expect = 3e-22
Identities = 304/450 (68%), Gaps = 17/450 (4%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| ||||| ||||| || ||||| || || || ||| ||||||| | ||| ||
Sbjct 1305149 CGCAACTCGCTGCTGGTGGCTCCTATGCCTACGGCTTCCACGTCTCAGATTCTCGGCCAC 1305208
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| ||||||||||||| || || | |||||| |||
Sbjct 1305209 AACGAGTGTTTCGAGCCATACACCTCCAACATCTACCTTCGTCGAGTTCAAGCAGGCGAG 1305268
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| || | ||||| | || | ||||| || ||| | || ||||||| |
Sbjct 1305269 TTCCTCGTCGTCAACCACTGGCTGATGAAGGATCTCATCAAGCTGGGCATGTGGAACGAG 1305328
Query 55664 CAGATCAAGA--CGGATATTGTGCG-GAACGG-GGGGTCC-GTCCAGAATCTGGAGATTC 55718
||||| |||| || || | || ||||| | ||| ||||| | | |||| |
Sbjct 1305329 CAGATGAAGAACCGAATCATCCACGACAACGGCTCGATCCAGTCCATCACC--CAGATCC 1305386
Query 55719 CTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCA---CAGAAGAGTCTGA 55775
| || || | ||||| || | ||||| | || | |||| ||| | |
Sbjct 1305387 CCGAAAACATCCGGGCCGTGTACCGAACCGCCTGGGA-AATCAAGGCCAGA--AGTATCA 1305443
Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835
| |||||| |||| ||| | | ||||| |||||||| ||||| || ||||| ||||
Sbjct 1305444 TCGACATGGCCGCTGCTCGAGCGCCCTACATTGACCAGTCGCAGTCGCTCAACATTTTCA 1305503
Query 55836 TG-GAG-AATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893
|| | | |||| ||| | ||| | | | ||||| || |||| ||||| | |||
Sbjct 1305504 TGCGCGAAATCACCCAC--GGCAAAATCACAGCCATGCATTTCCACGGCTGGAAAATGGG 1305561
Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGAC 55923
||||| || || |||||||| ||||| ||
Sbjct 1305562 CCTCAAAACAGGCATGTACTACCTGCGTAC 1305591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215719551800
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