Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq6 179 3e-40
seq2 86.0 5e-12
>seq6
Length=1972418
Score = 179 bits (198), Expect = 3e-40
Identities = 340/497 (68%), Gaps = 25/497 (5%)
Strand=Plus/Minus
Query 29872 CTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTC 29931
|||||| | ||||||| |||| ||| ||||||||||| |||| | | || | | |||
Sbjct 1597478 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGAGCGTCGCCCATGGTATGAATGAGCTC 1597419
Query 29932 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29991
||| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 1597418 TCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAAT 1597359
Query 29992 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 30051
||| ||||| || || || |||| || | |||| |||||| ||||||||||| |||
Sbjct 1597358 GTTGAAGGGAACACCCAGACCCAGATCACATGACCGCTGGTACAGCTGACACGACAGCCG 1597299
Query 30052 TCCGTCGCTCA----------------CGTAAAACTGACACATGGCGTGGCACGGAGGAA 30095
||| ||||||| |||| ||||| || | |||||| |||||||
Sbjct 1597298 TCC-TCGCTCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAA 1597240
Query 30096 GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTG 30155
||||||| | || ||| |||||||||||| ||| ||||| || | ||| | |
Sbjct 1597239 GAGCCATTTTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAG 1597180
Query 30156 GGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 30212
||||| | ||| || || ||| | |||| ||||||||||| ||| || | ||
Sbjct 1597179 GGTTGGTTTTGAGAGTGTGGATCAC--CTGTTTG-AGCTGATCCACACCCTGGCCAGTGT 1597123
Query 30213 AGTCTGCCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACC 30271
| |||| ||| ||| |||| || ||||| ||||| | ||| ||||| || || ||
Sbjct 1597122 AATCTGTG-TCACAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACA 1597064
Query 30272 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 30331
||||||||||||||||| || || | || || ||| |||| ||| || ||||
Sbjct 1597063 GGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGAT 1597004
Query 30332 CCGTTGGCGTCCCAGAT 30348
|| || ||||||| ||
Sbjct 1597003 CCATTTCCGTCCCAAAT 1596987
>seq2
Length=3147093
Score = 86.0 bits (94), Expect = 5e-12
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 52729 TCGTCAAGGTGAGGCTGAGGGCCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 52788
||||||||||| | || | || ||| | ||| |||| || ||||||||||| |||
Sbjct 2760002 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 2759943
Query 52789 -TCACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCG 52845
|||||| || ||||| || || | | | | | ||| | ||||| ||||| |||
Sbjct 2759942 GTCACGGA-CAGAAGGGTACCATTGGTGTGACTTACAGACAC--GAGGATATGCCATTCT 2759886
Query 52846 ACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 52905
|| || | |||||||| |||||||||||||||||||| ||||||| | ||||
Sbjct 2759885 CAGCCGAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTATGA 2759826
Query 52906 CCGT 52909
||||
Sbjct 2759825 CCGT 2759822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310196971772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |