Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq8 125 4e-24
seq11 104 1e-17
seq4 91.5 9e-14
>seq8
Length=911341
Score = 125 bits (138), Expect = 4e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || |||| || | |||||||||| |||||| || ||||| || || |||
Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| |||| || || || |||||||| || || | ||||| |||||||| ||
Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||| || | || ||| | || ||||| ||||||
Sbjct 549581 ATTCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 549639
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || |||||||| | || || ||||||||||||||
Sbjct 549640 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687
>seq11
Length=586936
Score = 104 bits (114), Expect = 1e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| |||| || || | ||| | ||||||||| ||||| || ||||| || || ||
Sbjct 306108 GCCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 306049
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| ||||| |||| ||||| || |||||||| || || | ||||| |||||||| ||
Sbjct 306048 GAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 305989
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| ||| |
Sbjct 305988 GATACCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGA 305930
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | ||| || || || ||||| | || ||||| |||||||||||
Sbjct 305929 CCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || || | |||| ||| || ||| |||||| || ||||| || || ||
Sbjct 305091 CCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 305032
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| |||| || || || |||||||| || || | ||||| |||||||| ||
Sbjct 305031 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 304972
Query 34600 ACTCCCTCCTTGTC 34613
| ||||||||||||
Sbjct 304971 ATTCCCTCCTTGTC 304958
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || || | |||| ||||||||| |||||| || ||||| || || ||
Sbjct 305879 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 305820
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| |||| || || || ||||| || || || | ||||| |||||||| ||
Sbjct 305819 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 305760
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| || | || ||| | ||| || || | ||| ||
Sbjct 305759 ATACCCTCCTTGTC-CTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAAC 305701
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || || || | || || ||||| ||||||||
Sbjct 305700 CTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
>seq4
Length=2565013
Score = 91.5 bits (100), Expect = 9e-14
Identities = 158/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || |||| || | || |||||| |||||| || ||||| || || |||
Sbjct 110119 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 110178
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| |||| || || || || ||||| || || | ||||| |||||||| ||
Sbjct 110179 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 110238
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | ||| ||||| ||||||
Sbjct 110239 ATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 110297
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCA 34705
|| | ||| || || || || || | || || ||||| || ||||
Sbjct 110298 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729442733553
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