Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq11 89.7 3e-13
>seq11
Length=586936
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || ||||| || ||||| ||||| || || || |
Sbjct 305881 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 305940
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | || | | || || || ||||| || ||| | || || || ||
Sbjct 305941 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 306000
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || ||||| || || || || |||| ||| || | ||| ||||||
Sbjct 306001 CAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAAC 306060
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || || |||||
Sbjct 306061 ATCCAGAAGGAATCCAC 306077
Score = 82.4 bits (90), Expect = 5e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || |||||||| ||||| || ||||||||||| ||||| ||| |
Sbjct 305093 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCC 305152
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | || | | || || || ||||| || ||| | || || || ||
Sbjct 305153 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 305212
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA 23765
||||| | || || || || || || || || ||
Sbjct 305213 CAGCGACTCATTTTCGCTGGTAAGCAGCTTGAGGA 305247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009431100828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |