Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq11 143 6e-29
seq4 140 8e-28
seq8 136 9e-27
>seq11
Length=586936
Score = 143 bits (158), Expect = 6e-29
Identities = 151/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| |||| ||||| || |||||||| || || || |||| ||||| |||| || ||||
Sbjct 305873 CGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTT 305814
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| ||||||||||||||||| || ||||| || ||||||||
Sbjct 305813 CGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCC 305754
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| || ||||| ||| || || ||||| || |||| || || || |
Sbjct 305753 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGG 305694
Query 225673 GTGATCGTCTTGCCCGTCA 225691
||||| ||||| || ||||
Sbjct 305693 GTGATGGTCTTTCCAGTCA 305675
Score = 141 bits (156), Expect = 2e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| |||| || |||||||||||||||||||| || |||| ||||| |||| | |||
Sbjct 306101 CGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTT 306042
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || |||||||||||||| || ||||| || || |||||
Sbjct 306041 CGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCC 305982
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || ||||| ||||| || | || || || |
Sbjct 305981 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAGG 305922
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || || | || || | ||| | |||||
Sbjct 305921 GTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 111 bits (122), Expect = 4e-19
Identities = 124/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| |||| || || || || || ||||| || || |||| ||||| |||| || ||||
Sbjct 305085 CGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTT 305026
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || ||||| || ||||| || ||||| || ||||| ||
Sbjct 305025 CGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCC 304966
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGG 225658
|||||||| || ||||| ||| || ||||||||||| ||||
Sbjct 304965 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGG 304920
>seq4
Length=2565013
Score = 140 bits (154), Expect = 8e-28
Identities = 163/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| |||| |||||||||||| |||||||| || || |||| ||||| || | | ||||
Sbjct 110125 CGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTT 110184
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || ||||| || ||||| || ||||| || ||||| ||
Sbjct 110185 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCC 110244
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || || |||||||| || | ||||| || |
Sbjct 110245 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGG 110304
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712
||||| |||||||| || | || || | || | |||||
Sbjct 110305 GTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq8
Length=911341
Score = 136 bits (150), Expect = 9e-27
Identities = 164/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| |||| ||| || || ||||||||||| || || |||| ||||| || | | |||
Sbjct 549467 CGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTT 549526
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || |||||||||||||| || ||||| || ||||| ||
Sbjct 549527 CGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCC 549586
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || ||||||||||| || | ||||| || |
Sbjct 549587 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGG 549646
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715
||||| ||||| || || | || || | || | |||||||
Sbjct 549647 GTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530573548454
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |