Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3 170 2e-37 >seq3 Length=2716294 Score = 170 bits (188), Expect = 2e-37 Identities = 566/872 (65%), Gaps = 15/872 (2%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 || ||||| ||||| || ||||| |||||||| || || ||||| | | ||| || || Sbjct 856590 TTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTC 856649 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTT---AGAGCTACA 4373 ||||| || || || || || || | |||||| || | || ||||| || Sbjct 856650 TCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGG---AGTTGCCGAGAGCAACC 856706 Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 |||| ||||| || ||||| || || ||||||| |||||| | | ||| ||||| | Sbjct 856707 AGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGC 856766 Query 4434 AATCTCACAGGT-AGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | |||||| || |||| |||| ||||| || || ||| ||||| || || Sbjct 856767 AGAC-CACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAAT 856825 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 | || | | | | || || ||| || | | || || | | ||| || Sbjct 856826 CACGTCCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGCGAGAAGAGCAGACAGGC 856885 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||| || |||| ||| ||||||| | || || ||||| || || || | ||||| Sbjct 856886 AAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGG 856945 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | ||||| ||| || ||||| || || | ||| || || || || ||||| ||||| Sbjct 856946 CATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCC 857005 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT--TTGTCTTTAATC 4730 || ||||||||||| |||| | | | | | | || | | | || | ||| ||| Sbjct 857006 CTCGACGGCGGCAAAAGCTA-TCAGCCGCTCGCCAAAG-GTCGACTCGTCGTCGGAGATC 857063 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790 || || | ||||||| || || ||||| | ||| || || || | || ||||| || Sbjct 857064 CACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAAC 857123 Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 | | || || ||||| | || || ||||| || || || ||| |||| Sbjct 857124 AGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTTTCC 857183 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 || || || || || || ||||| || ||||| ||||| | || || | || || Sbjct 857184 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACCTGC 857243 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 || ||| | |||| || || | ||| ||||| || ||||| || || ||||| Sbjct 857244 ACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCAAAG 857303 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGG 5027 || |||| || || || || ||| || | ||||| || | | || | ||||| | Sbjct 857304 AAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAGTCG 857363 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087 || || || | ||||| || || | ||||| || || || || || || ||| Sbjct 857364 CCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTG 857423 Query 5088 TACATAGACCAAATATCAGGATACTGAATCGG 5119 ||||| ||| || || | ||||| || || Sbjct 857424 TACATCTGCCAGATCTCGTGGTACTGGATGGG 857455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049386608653