Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 185 6e-42
seq2 89.7 4e-13
>seq6
Length=1972418
Score = 185 bits (204), Expect = 6e-42
Identities = 406/605 (67%), Gaps = 25/605 (4%)
Strand=Plus/Minus
Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197
|||||| | |||||||||||| ||| ||||||||||| |||| ||| || | | |||
Sbjct 1597478 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGAGCGTCGCCCATGGTATGAATGAGCTC 1597419
Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257
||| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 1597418 TCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAAT 1597359
Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 27317
||| ||||| || || || |||| || | |||| |||||| ||||||||||| |||
Sbjct 1597358 GTTGAAGGGAACACCCAGACCCAGATCACATGACCGCTGGTACAGCTGACACGACAGCCG 1597299
Query 27318 TCCATCGCTTA----------------CGTAAAACTGACATATGGCGTGGCACGGAGGAA 27361
||| ||||| | |||| ||||| || | |||||| |||||||
Sbjct 1597298 TCC-TCGCTCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAA 1597240
Query 27362 GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTG 27421
||||||| | || ||| |||||||||||| ||| ||||| || | ||| | |
Sbjct 1597239 GAGCCATTTTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAG 1597180
Query 27422 GGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478
||||| | ||| || || ||| | |||| ||||||||||| ||| || | ||
Sbjct 1597179 GGTTGGTTTTGAGAGTGTGGATCAC--CTGTTTG-AGCTGATCCACACCCTGGCCAGTGT 1597123
Query 27479 AGTCTACCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACC 27537
| ||| ||| ||| |||| || ||||| ||||| | ||||||||| || || ||
Sbjct 1597122 AATCTGTG-TCACAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACA 1597064
Query 27538 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 27597
||||||||||||||||| || || | || || ||| |||| ||| || ||||
Sbjct 1597063 GGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGAT 1597004
Query 27598 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 27657
|| || ||||||| || | | || ||| |||| ||| || || | ||
Sbjct 1597003 CCATTTCCGTCCCAAATATGAATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCG 1596944
Query 27658 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 27717
|| ||||| || |||||||||| ||| | |||| |||| ||| || || |
Sbjct 1596943 GCCACAAACCAGAGAAGCTCCTCCAAAACGCCTCGGTAAAAAACCCGCTTTGTGGTCAAC 1596884
Query 27718 AGGGG 27722
|||||
Sbjct 1596883 AGGGG 1596879
>seq2
Length=3147093
Score = 89.7 bits (98), Expect = 4e-13
Identities = 133/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 48509 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-C 48567
||||||||||| | || | ||| ||| | ||| |||| || ||||||||||| || |
Sbjct 2760002 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 2759943
Query 48568 TTCACGGCGCAAAAGGGGACATGTGGAGC--CGTCCTGACCCAGGAGGACATGCCCTTCG 48625
|||||| || ||||| || ||| | | | | ||| | ||||| ||||| |||
Sbjct 2759942 GTCACGGA-CAGAAGGGTACCATTGGTGTGACTTACAGACAC--GAGGATATGCCATTCT 2759886
Query 48626 ACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 48685
|| || | |||||||| |||||||||||||||||||| ||||||| | ||||
Sbjct 2759885 CAGCCGAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTATGA 2759826
Query 48686 CCGT 48689
||||
Sbjct 2759825 CCGT 2759822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507015361871
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |