Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 7e-26
>seq3
Length=2716294
Score = 132 bits (146), Expect = 7e-26
Identities = 383/588 (65%), Gaps = 6/588 (1%)
Strand=Plus/Plus
Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199
||| ||||| || || ||||| || |||| || | ||||| || || |||||
Sbjct 856880 ACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAG 856939
Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259
|||||||| || || || || |||||||| || || | ||||| || || || |||||
Sbjct 856940 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAA 856999
Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT-- 48317
||||| || ||||| ||||| || | || | ||| || | | | |||| ||
Sbjct 857000 GATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGA 857059
Query 48318 -ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376
|||||| | ||||| || ||||||||||| | || || || || || || || ||
Sbjct 857060 GATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTT 857119
Query 48377 AAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACAT 48436
|| || || || || ||| || || | ||| || || || | || ||| |
Sbjct 857120 GAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGT 857179
Query 48437 TTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGAT 48496
||| ||||| || || || || ||||| || ||||| || || | || || | ||
Sbjct 857180 TTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGAC 857239
Query 48497 CTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGC 48556
||| ||||| | ||||| || ||| ||||| || || || ||||| ||||||
Sbjct 857240 CTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGC 857299
Query 48557 AAAAAATGCTAATACATGTTTAATAAAATA---TTTTTCGTTGGAAGTCAGTTTATTCCA 48613
||| || || | || || || || | | |||||| | | || | |||
Sbjct 857300 AAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCA 857359
Query 48614 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTT 48673
||| || || || | ||| | || || || ||||| || || ||||| || ||
Sbjct 857360 GTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTT 857419
Query 48674 TTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|| ||||| | ||| || || ||| ||||| ||||| | |||||
Sbjct 857420 CTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 857467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668443982240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |