Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3 132 7e-26 >seq3 Length=2716294 Score = 132 bits (146), Expect = 7e-26 Identities = 383/588 (65%), Gaps = 6/588 (1%) Strand=Plus/Plus Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || || ||||| || |||| || | ||||| || || ||||| Sbjct 856880 ACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAG 856939 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 |||||||| || || || || |||||||| || || | ||||| || || || ||||| Sbjct 856940 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAA 856999 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT-- 48317 ||||| || ||||| ||||| || | || | ||| || | | | |||| || Sbjct 857000 GATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGA 857059 Query 48318 -ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376 |||||| | ||||| || ||||||||||| | || || || || || || || || Sbjct 857060 GATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTT 857119 Query 48377 AAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACAT 48436 || || || || || ||| || || | ||| || || || | || ||| | Sbjct 857120 GAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGT 857179 Query 48437 TTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGAT 48496 ||| ||||| || || || || ||||| || ||||| || || | || || | || Sbjct 857180 TTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGAC 857239 Query 48497 CTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGC 48556 ||| ||||| | ||||| || ||| ||||| || || || ||||| |||||| Sbjct 857240 CTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGC 857299 Query 48557 AAAAAATGCTAATACATGTTTAATAAAATA---TTTTTCGTTGGAAGTCAGTTTATTCCA 48613 ||| || || | || || || || | | |||||| | | || | ||| Sbjct 857300 AAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCA 857359 Query 48614 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTT 48673 ||| || || || | ||| | || || || ||||| || || ||||| || || Sbjct 857360 GTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTT 857419 Query 48674 TTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || ||||| | ||| || || ||| ||||| ||||| | ||||| Sbjct 857420 CTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 857467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668443982240