Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq11 125 2e-23
seq8 123 6e-23
seq4 109 1e-18
>seq11
Length=586936
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| |||||| ||||| ||||||||||| || ||||||||||| |||| | |||||
Sbjct 305871 GAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCG 305812
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || || ||||||||||| | ||||||||||| | || || ||
Sbjct 305811 TCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTC 305752
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || ||||| | || | | | || || ||| || || || ||
Sbjct 305751 CTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGT 305692
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || ||||| || |||| ||||||
Sbjct 305691 GATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| ||| ||||| || ||||| || || || ||||||||||| |||| | ||||
Sbjct 306099 GAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCG 306040
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || |||||||||||||| | ||||||||||| | ||| || ||
Sbjct 306039 TCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTC 305980
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | |||| ||| ||| || || || ||
Sbjct 305979 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAGGGT 305920
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || ||||||||||| | ||||||
Sbjct 305919 GATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 95.1 bits (104), Expect = 3e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| ||| || |||||||| || ||||| || ||||||||||| |||| | |||||
Sbjct 305083 GAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCG 305024
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || |||||||| || || | ||||||||||| | ||||| ||
Sbjct 305023 TCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTC 304964
Query 152006 CTTTTCTTGAATTTT 152020
||| || ||||| ||
Sbjct 304963 CTTGTCCTGAATCTT 304949
>seq8
Length=911341
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| || || ||||| ||||| ||||| || ||||||||||| || | | ||||
Sbjct 549469 GAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCG 549528
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || |||||||||||||| | ||||||||||| | ||||| ||
Sbjct 549529 GCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTC 549588
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| || ||||| ||
Sbjct 549589 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 549648
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106
||||| || || || || ||||| || || | ||||||||
Sbjct 549649 GATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689
>seq4
Length=2565013
Score = 109 bits (120), Expect = 1e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| |||||||| || ||||| ||||| || ||||||||||| || | | |||||
Sbjct 110127 GAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCG 110186
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || |||||||| || || | ||||||||||| | || || ||
Sbjct 110187 GCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTC 110246
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| || || || ||
Sbjct 110247 CTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGT 110306
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103
|| || ||||| || || ||||| || |||| ||||
Sbjct 110307 GATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820193883511
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |