Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq8 163 6e-35
seq11 158 3e-33
seq4 140 7e-28
seq1 116 8e-21
seq3 102 2e-16
>seq8
Length=911341
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || ||||| | ||| || || ||||||||||||||||
Sbjct 549460 ACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 549519
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || ||||| ||||| | || || ||||| ||
Sbjct 549520 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 549579
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 549580 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 549639
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101
|| || ||||| |||||||| || | ||||| || || ||||||||||
Sbjct 549640 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689
>seq11
Length=586936
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || || || | ||| ||| || |||||||||||||| |
Sbjct 306107 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 306048
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || ||||| || || || ||||| ||||| | || || ||||| ||
Sbjct 306047 AGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 305988
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || ||| | ||||||||||| |||| |||||
Sbjct 305987 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACC 305928
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 305927 TCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||||||| | || || || |||||||||||||| |
Sbjct 305880 ACCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 305821
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || || || ||||| | || || ||||| ||
Sbjct 305820 CAGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGG 305761
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| || ||||| | || ||| | || || || || || | || ||
Sbjct 305760 AATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAAC 305701
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| ||||| || || ||||||||
Sbjct 305700 CTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 125 bits (138), Expect = 1e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995
|| ||||||||||| || || || || || || || | || || ||||| ||||||
Sbjct 305256 GTTCGGCCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATA 305197
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||| | || ||| | ||||||||||| || | || || |||
Sbjct 305196 CCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCG 305137
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 305136 AGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093
Score = 104 bits (114), Expect = 5e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||||||| | ||| || || |||||||||||||| |
Sbjct 305092 ACCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 305033
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || ||||| || || | || || ||||| ||
Sbjct 305032 CAGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGG 304973
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || ||| | ||||| ||||| || | |||||
Sbjct 304972 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 304913
>seq4
Length=2565013
Score = 140 bits (154), Expect = 7e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || || || || | ||| || || ||||||||||||||||
Sbjct 110118 ACCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 110177
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || ||||| || |||| || || ||||| ||
Sbjct 110178 AAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGG 110237
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | || || ||||| |||| || ||
Sbjct 110238 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 110297
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098
||||| ||||| ||||| || || | ||||| || || || ||||
Sbjct 110298 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq1
Length=3339266
Score = 116 bits (128), Expect = 8e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 317020 TCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTG 317079
|||| || ||||| || || | ||| ||||| |||| || | |||||| || |||||
Sbjct 1183214 TCCTGGGTGGGGAAACCCTCAACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTA 1183273
Query 317080 CCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTG 317139
|||||||| |||||||| || ||||| || || || ||| || || ||||
Sbjct 1183274 CCAGCACCGTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGAGTCGAAGCTGGGTT 1183333
Query 317140 TTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCG 317199
|||||| |||||||| |||| || ||||||||||||||||| | |||||| |||||
Sbjct 1183334 CGGTTCAGCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCT 1183393
Query 317200 CC 317201
||
Sbjct 1183394 CC 1183395
Score = 87.8 bits (96), Expect = 4e-12
Identities = 111/152 (73%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 315708 GAGACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTG 315767
|||| ||||| |||| | ||||||| ||||||||||||||||| | |||||| | ||
Sbjct 1181874 GAGAGTCTCGA--TCCAGATAGTTGGTAGGCTCATCAAGAACGATCAGATGGGGTCGCTG 1181931
Query 315768 CCATAGAGCGGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCG 315827
||| | |||| | | || ||||| | || || ||||||||||| || ||||| ||
Sbjct 1181932 CCAGGTACAGGCGGCAAGCACCAGCTTGACCTTCTGTCCACCAGACAGACCTCGGATTCG 1181991
Query 315828 AGAATGAGTGGTAAATTCTGGGTCAAGGCCAA 315859
|| |||| | || || || || || ||||
Sbjct 1181992 GGAGTGAGAGACAAGCTCGGGCTCGAGACCAA 1182023
>seq3
Length=2716294
Score = 102 bits (112), Expect = 2e-16
Identities = 564/889 (63%), Gaps = 34/889 (4%)
Strand=Plus/Minus
Query 229535 CTTCCCTATTCAATACCCCGACCTCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTG 229594
|||||| || || |||| ||| ||||| | ||||| |||||||| | ||| | || ||
Sbjct 857459 CTTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTG 857400
Query 229595 GACCACGGAGGAAGTCCCCCTAAATGCA--GACGTCGTCGACTGGCGCGAGAAAC---TC 229649
|||| | ||||| | || ||| ||| | | ||||||| ||||| | ||
Sbjct 857399 GACCGCCGAGGAGATTGATCTCG--GCAAGGACATGGGCGACTGG---GAGAACCGGCTC 857345
Query 229650 AACGACGATGAACGCCATTTCATCAAGCACATTCTCGGGTTTTTTGCAGGTTCCGACGGT 229709
||| |||| || || |||||| |||| | || | || ||||| | |||||| |||
Sbjct 857344 AACAACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGT 857285
Query 229710 ATCGTGATGGAAAACTTGCAGACTAACTTCAGCGTCGAAGTAACGGTCCCAGAGGCACGG 229769
|| |||| || ||| || | ||| || ||| || |||||| ||||| |
Sbjct 857284 ATTGTGAACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAG 857225
Query 229770 CAGTTTTACGCATACCAGACGTTCAATGAATCTGTTCATTCGGAACAGTATGCCCTTCTT 229829
|| |||| | ||||| | | || | || |||||| ||| | || ||
Sbjct 857224 TGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCTG 857165
Query 229830 ATTGACGCGCTCATTTCCGACGAGCGAGAGCGTGCCGAACTGTTCGACGCCATCGAAAAC 229889
|| ||| | ||| ||| ||||| || | |||||| |||||||||| | |
Sbjct 857164 ATCGACACATACATCAAGGACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACC 857105
Query 229890 ATCCCGGCGGTCCATAACAAAGCGCGTTGGGCTCAGAAGTGG--CTGGAAC--CCAGTAA 229945
||||| || | || || || ||||| | |||||| || || | |||
Sbjct 857104 ATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCG 857045
Query 229946 ATCGTTTGCAGAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAG 230005
| | || || ||||| || | || | | ||| ||||| || | ||||||||
Sbjct 857044 ACCTTTGGC-GAGCGGCTGATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTC 856986
Query 230006 TTTCTGCGCCATCTTTTGGCT-ACGCAACAAGGGCGTCATGCCCGGGCTCGGTCTGTCGA 230064
||| | ||||||| ||||| | | | | ||| | |||||||||| ||| | || |
Sbjct 856985 GTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTCACCTTCTCCA 856927
Query 230065 ACGAATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGGTCTTGTATTC-- 230122
|||| ||||| | | ||||| ||||| ||| | |||| | |||| | |||
Sbjct 856926 ACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCT--GTCTGCTCTTCTC 856869
Query 230123 GAAGCTAAATAACAAACTACCTTTCGAAACGGT------GAAACAAATCGTCACAGAAGT 230176
| | || | ||| | ||| | | | | | | | | || ||| || |
Sbjct 856868 GCACCTCGAGAAC---CGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTC---GAGGC 856815
Query 230177 AGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAA 230236
|||| | || |||||||| | |||||| | || || |||| |||| |||||
Sbjct 856814 CGTTGGTATCGAGCAGGAGTTCCTGACCGACGCCCTGCCCTGTGGTCTGCTCGGAATGAA 856755
Query 230237 TGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGG 230296
|| | |||||| | || || || || || || || || ||| | | || || || ||
Sbjct 856754 CGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCTCTCGG 856695
Query 230297 GTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCA 230356
|| || || || ||||||| |||||||||| || |||||| ||| || ||
Sbjct 856694 CAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGC 856635
Query 230357 GGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404
|| || || ||||||||||| ||||| || ||| || || ||||||
Sbjct 856634 CGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTACCAGAAGGCC 856586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738650134814
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