Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 2e-23
seq11 122 6e-23
seq8 107 1e-18
>seq4
Length=2565013
Score = 123 bits (136), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || |||| |||| || || ||||| || ||| |||||| ||||||||||| ||
Sbjct 110116 ATACCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCA 110175
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| || |||| || |||||||| ||||| || |||| |||||||| || |
Sbjct 110176 GAAAGAGTT--CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCG 110233
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| ||| | | | |||||||||| || |
Sbjct 110234 GGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACT 110293
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
||||||| | || || ||||| || || |||||||| || ||||||||||
Sbjct 110294 CCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq11
Length=586936
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||| |||| | ||| ||||| || ||| ||||| ||||||||||| |||| |
Sbjct 306107 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 306048
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || |||||||| ||||| ||||| | |||||||| || | ||
Sbjct 306047 AGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 305988
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||| ||||| ||| ||||| ||| | | | || ||||| | || || |||
Sbjct 305987 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACC 305928
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || |||||||| || |||||||||||||| || |||||
Sbjct 305927 TCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 118 bits (130), Expect = 8e-22
Identities = 167/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||| |||| | ||||| || || || |||||| ||||||||||| ||
Sbjct 305883 CATACCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 305824
Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| ||||| || |||| || |||||||| || || ||||| | |||||||| ||
Sbjct 305823 GGACAGAGTT--CGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCC 305766
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | ||| ||||| ||| ||||| ||| | | | ||||| |||| |||
Sbjct 305765 GGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGAC 305706
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || |||||||| || |||||||| || ||||| |||||
Sbjct 305705 TCAACCTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242
|| || |||||||| || || || || | |||||||| || | || | ||| |||||
Sbjct 305247 TCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTG 305188
Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
||| ||||| ||| | | | || ||||||| ||| || ||||| | || ||
Sbjct 305187 TCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGAGTGATG 305128
Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| ||||||||||||||||| || |||||
Sbjct 305127 GTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093
Score = 89.7 bits (98), Expect = 4e-13
Identities = 133/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||| |||| | ||||| ||||| ||| |||||| ||||||||||| ||
Sbjct 305095 CATACCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 305036
Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| ||||| || |||| || |||||||| ||||| || || | |||||||| ||
Sbjct 305035 GGACAGAGTT--CGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCC 304978
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | || ||||| ||| ||||| ||| | | | |||||||||| |||
Sbjct 304977 GGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGAC 304918
Query 44285 TCCACCT 44291
|| ||||
Sbjct 304917 TCGACCT 304911
>seq8
Length=911341
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||| |||| || || || || || ||| |||||| ||||||||||| || |
Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || |||||||| ||||| ||||| | |||||||| || | ||
Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||| | | | |||||||||| || ||||||
Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 549640
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| || || |||||||| || || || |||||
Sbjct 549641 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990220117297
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |