Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq11 174 4e-38 seq8 170 5e-37 seq4 161 2e-34 >seq11 Length=586936 Score = 174 bits (192), Expect = 4e-38 Identities = 170/219 (78%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || ||||| || |||||||||||||| || || ||| Sbjct 305884 CAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCTGAC 305943 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 305944 ACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 306003 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||| || ||||| || || ||| | || || |||| || ||| || Sbjct 306004 CGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAACATC 306063 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || || || ||||| | ||||| || Sbjct 306064 CAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGA 306102 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || ||||| || |||||||||||||| || ||| || Sbjct 305656 CAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGAT 305715 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || || || ||||||||||| Sbjct 305716 ACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 305775 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||||||| || || |||||||| || ||| | ||||| |||| || ||| || Sbjct 305776 CGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAACATC 305835 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || || ||||| || | ||||| || Sbjct 305836 CAGAAGGAGTCTACTCTCCATCTGGTCCTCCGACTCCGA 305874 Score = 141 bits (156), Expect = 2e-28 Identities = 131/166 (79%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 177977 CTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA 178036 ||| ||||||||||| |||||||| |||||||||||||| || ||||| || ||||| Sbjct 304921 CTCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGA 304980 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 |||||| ||||| || |||||||| || |||||||| || ||| | ||||| |||| || Sbjct 304981 CCAGCAGCGACTCATTTTCGCCGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTA 305040 Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||| |||| || || || || || ||||| ||| | ||||| || Sbjct 305041 CAACATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGACTCCGA 305086 Score = 136 bits (150), Expect = 1e-26 Identities = 123/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| ||||| || ||||| |||||||| || ||| ||| Sbjct 305096 CAGATTTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCCGAC 305155 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 305156 ACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 305215 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 ||||| || ||||| || || ||||| || ||||| Sbjct 305216 CGACTCATTTTCGCTGGTAAGCAGCTTGAGGATGG 305250 >seq8 Length=911341 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || || || || || || |||||||| |||||||| || ||| Sbjct 549684 CAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 549625 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 549624 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 549565 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||| || |||||||| || || | || ||| | || || ||| || Sbjct 549564 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 549505 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || || ||||| ||| || ||||| || Sbjct 549504 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 549466 >seq4 Length=2565013 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || || || || || ||||||||||||||||| || ||| Sbjct 110342 CAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGAC 110283 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 110282 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 110223 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || |||||||| || |||||||| || || | |||||| | || || ||| || Sbjct 110222 CGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAACATC 110163 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || ||||| ||||| || ||||| || Sbjct 110162 CAGAAGGAGTCCACTCTGCACCTTGTCCTGCGACTCCGA 110124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730567664954