Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq8 150 2e-31
seq4 141 9e-29
seq11 140 3e-28
>seq8
Length=911341
Score = 150 bits (166), Expect = 2e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || ||||| || ||| ||||||||| ||||| |||||
Sbjct 549457 ACCACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 549516
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| ||||| || |||| ||||||||||| |||||||| || || ||||| |||||||
Sbjct 549517 AGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGG 549576
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810
||||| | |||||||||| ||| || ||| ||| | | | |||||| ||||
Sbjct 549577 GGGAATTCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACT 549635
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| | || || || ||||| || || ||||| || |||||||||||
Sbjct 549636 CCACCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687
>seq4
Length=2565013
Score = 141 bits (156), Expect = 9e-29
Identities = 169/227 (74%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || || ||||| ||| ||||||||| ||||| ||||| ||
Sbjct 110119 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 110178
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| |||||||||||||||||||| ||||| ||||| ||||||| ||||
Sbjct 110179 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 110238
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | |||||| ||||||||
Sbjct 110239 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCAATGGTGTCGGAAGACTCCAC 110297
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861
||| | || || || || || || || ||||| || || || ||||
Sbjct 110298 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq11
Length=586936
Score = 140 bits (154), Expect = 3e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || | ||| || || || ||| |||||||| ||||| ||||||||
Sbjct 306108 GCCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 306049
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || |||| || |||||||| |||||||| || || ||||| ||||||| |||
Sbjct 306048 GAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 305989
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||||| ||| || ||| ||| | | | |||||| ||||| |
Sbjct 305988 GATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTGTCAGAAGACTCGA 305930
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || || || ||||| ||||||||||||||
Sbjct 305929 CCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||||| || || ||||||||| ||||| ||||||||
Sbjct 305879 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 305820
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| ||||||||||| || ||||| || || ||||| ||||||| ||||
Sbjct 305819 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 305760
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| | || | | ||| | | | || ||| ||||| ||
Sbjct 305759 ATACCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAAC 305701
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || ||||| ||||| || || ||||||||
Sbjct 305700 CTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 118 bits (130), Expect = 1e-21
Identities = 107/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||||| || ||| ||||||||| ||||| ||||||||
Sbjct 305091 CCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 305032
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| ||||||||||| |||||||| || || ||||| ||||||| ||||
Sbjct 305031 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 304972
Query 41756 ACGCTCTCCTTGTCC 41770
| | ||||||||||
Sbjct 304971 ATTCCCTCCTTGTCC 304957
Score = 95.1 bits (104), Expect = 1e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 41708 TCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTG 41767
|| || |||||||| || ||||| || || ||||| ||||||| ||||| | |||||||
Sbjct 305247 TCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTG 305188
Query 41768 TCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTAT 41826
||| ||| || ||| | || | | | ||||||| ||||| ||||| | || ||
Sbjct 305187 TCCTGGATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGAGTGAT 305129
Query 41827 CGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || ||||| ||||||||||||||
Sbjct 305128 GGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303763069200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |