Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 150 2e-31 >seq2 Length=3052417 Score = 150 bits (166), Expect = 2e-31 Identities = 458/705 (65%), Gaps = 12/705 (2%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| ||| || || || ||||||||||| || ||||| | ||||| || |||||| Sbjct 506595 TGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCC 506654 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 ||||| || || || || || | | | | || |||| || || | | | | Sbjct 506655 ATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAGA 506714 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 | || || ||||| || || || |||||||| | | | |||||| || | |||| Sbjct 506715 CGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCA 506774 Query 16856 ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--TAC 16913 || ||||| || || | || ||||| || |||| || || ||| | | | Sbjct 506775 CAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCC 506834 Query 16914 TAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973 | |||| | || || ||| | | ||| || || | ||| || || || | Sbjct 506835 T--CAACAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGT 506892 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | || | |||||||||| | ||| || ||||| || || || | || ||||| Sbjct 506893 CAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGA 506952 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 ||||| ||||| | ||| || || | |||||| || || || ||||| || ||||||| Sbjct 506953 GACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGA 507012 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCT 17153 ||| ||||| || || | ||| || | | || | |||| || ||||| || Sbjct 507013 CGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGA 507072 Query 17154 GCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAAT 17209 | |||| ||||| |||| ||| ||||| || || || ||||| || || || Sbjct 507073 GGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGG 507132 Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 ||| || ||| |||| | || || || ||||| || || ||| | |||||| Sbjct 507133 TTCGCTCTTTGG----GGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAG 507188 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329 || ||||||||||| ||||| || ||||| ||||| ||| || | || || Sbjct 507189 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACC 507248 Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || || ||||||| || | || || ||||| ||||| |||||| Sbjct 507249 TCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCG 507293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545412389720