Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=3052417 Score = 107 bits (118), Expect = 2e-18 Identities = 285/435 (66%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || || ||||| || || || ||||||| | ||| || |||||||| || || Sbjct 506880 AGGCAGGCAAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTG 506939 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| ||||| ||||| | |||||| || | || || || || || ||| Sbjct 506940 AGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 506999 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || || ||||| || | ||||| || || | ||| || | | || | |||| | Sbjct 507000 AAGATGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCG 507059 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 ||||| || | |||| ||||| |||| || || || || || || ||||| Sbjct 507060 GAGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCG 507119 Query 16439 TTAAACAATT----TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || |||| | || || ||| | || | || || || || ||||| | Sbjct 507120 TTGAACAGGTAGGTTCGCTCTTTGGGG----TCCTTGATGTATGTGTCGATCAGCAGCGA 507175 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 ||| | || ||||| |||||||| || ||||| || || |||||||| ||||| Sbjct 507176 GTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTC 507235 Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | || || || || | ||||| || |||||||||| || ||||||||||| Sbjct 507236 GGGGGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGA 507295 Query 16615 TGCAGCAAAAAACGC 16629 |||||||| || || Sbjct 507296 GGCAGCAAAGAATGC 507310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414214612280