Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
>seq2
Length=3052417
Score = 107 bits (118), Expect = 2e-18
Identities = 285/435 (66%), Gaps = 8/435 (2%)
Strand=Plus/Plus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || || ||||| || || || ||||||| | ||| || |||||||| || ||
Sbjct 506880 AGGCAGGCAAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTG 506939
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318
| || ||||| ||||| ||||| | |||||| || | || || || || || |||
Sbjct 506940 AGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 506999
Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378
|| || ||||| || | ||||| || || | ||| || | | || | |||| |
Sbjct 507000 AAGATGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCG 507059
Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438
||||| || | |||| ||||| |||| || || || || || || |||||
Sbjct 507060 GAGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCG 507119
Query 16439 TTAAACAATT----TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494
|| |||| | || || ||| | || | || || || || ||||| |
Sbjct 507120 TTGAACAGGTAGGTTCGCTCTTTGGGG----TCCTTGATGTATGTGTCGATCAGCAGCGA 507175
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
||| | || ||||| |||||||| || ||||| || || |||||||| |||||
Sbjct 507176 GTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTC 507235
Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614
| || || || || | ||||| || |||||||||| || |||||||||||
Sbjct 507236 GGGGGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGA 507295
Query 16615 TGCAGCAAAAAACGC 16629
|||||||| || ||
Sbjct 507296 GGCAGCAAAGAATGC 507310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414214612280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |