Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 >seq3 Length=3339761 Score = 147 bits (162), Expect = 3e-30 Identities = 467/717 (65%), Gaps = 23/717 (3%) Strand=Plus/Minus Query 145567 TGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACC 145626 ||||| | ||| ||||| ||| |||||||||| |||| | || ||||||| | Sbjct 1502402 TGGGGCTTGTATCCCTCGAGCACAAAGTCCTCGTAGTTGAAACCGTCAATGTCCTTGATA 1502343 Query 145627 CGCCTCAGG--ATCCTGAGCCTGGGAAAG-GGCCGGGGGCTCCTGGTCAGCTGGAGCTTC 145683 ||| | | ||||| |||| || |||| || | || | | ||| |||| Sbjct 1502342 T--CTCGTGCAAAAGTGAGCTTGGGGAACTGGCCTGGCGTTCGAGCA-ATCTGCTGCTTG 1502286 Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 || | |||||||| | ||| || || ||||| |||| | ||| |||| || || Sbjct 1502285 AGTGCGTCCACGTGATCCTTGTACACATGGGCGTCTCCCATGGTGTGAATGAGCTCTCCA 1502226 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTG 145803 || | | |||| ||||| | ||| ||| ||||| | |||| ||| |||||| Sbjct 1502225 CAGTCCAAATCGGTGACCTGGGCAATCATTCGGGTGAGCAGAGCGTAGGAGGCAATGTTG 1502166 Query 145804 AAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGC--TCCC 145861 ||||| || || || |||| ||| | || ||||| |||||||| || || || ||| Sbjct 1502165 AAGGGGACTCCAAGACCCAGGTCACATGATCGCTGATACAGCTGACACGACAGACGTCCT 1502106 Query 145862 CG--CC-----------CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCC 145908 || || || ||| || |||||||| | | ||| ||||| || || ||| Sbjct 1502105 CGTTCCGAGTTTTTGTACGACACATAAAACTGGCAAAACATGTGACAGGGAGGAAGCGCC 1502046 Query 145909 ATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTC 145968 || || || || || |||||||| || | || | || | | | | ||||| Sbjct 1502045 ATCTTTGGGAGATCGGCGGGGTTCCATGCAGACAGAATGATTCGACGGTCGTGAGGGTTG 1501986 Query 145969 CTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC 146028 | ||| ||||| | |||||||||||||||| || || |||||| || Sbjct 1501985 GTTCTGAGAGTGTGTATCACCTGTTTGAGCTGGTCCACGCCTTGGCCAGTGTAATCCGTG 1501926 Query 146029 TTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGG 146088 | | | | |||| |||| ||||| || | ||| ||||| || ||||| || |||||| Sbjct 1501925 TCACAATTCTTGTACTCGGCTCCGAAATGGCGCCATTGGAAGCCATAGACCGGTCCCAGG 1501866 Query 146089 TCCCCGGGCTCC-CTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGC 146147 || || ||| ||||| |||||||||||| | ||||| ||| || || || | Sbjct 1501865 TCTCCCT-CTCGTCTGTGGCCCAGCCCGGCCTTTTCCAGGAACTCCTTAGATCCATTTCC 1501807 Query 146148 GTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 ||||||||| | | | || || || | ||| ||| ||| | || | || Sbjct 1501806 GTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTTTTGCCGTCGGTGCATCCAGCCACAAA 1501747 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 ||| | ||||| || || || || | ||||||| | ||||||||| |||||||| Sbjct 1501746 CCACAAAAGCTCCTCCAGAACGCCTCGGTAGAAGACTCGCTTGGTGGTGAGCAGGGG 1501690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076586097160