Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq6 87.8 1e-12
seq5 82.4 6e-11
>seq6
Length=3777980
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|| || ||| ||||||||| ||||||||||| || || |||| || || ||
Sbjct 1363877 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGC 1363818
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| |||||||| || | ||||| ||||| || || | |||||||||||| || ||
Sbjct 1363817 TTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTG 1363758
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
||| || | | | |||| | ||||||||| | ||| || ||||| || ||
Sbjct 1363757 GACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCGGTA 1363698
Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||| || |||||
Sbjct 1363697 AGGGTCTTGACAAAAATCTGCAT 1363675
>seq5
Length=4047401
Score = 82.4 bits (90), Expect = 6e-11
Identities = 92/122 (75%), Gaps = 6/122 (5%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGT 45190
|| || ||| ||||||||||||||||||||| ||| | ||| ||| ||| ||
Sbjct 2184037 TGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGGCCATCCTCG---AGC 2183981
Query 45191 TGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATT 45250
|| || |||||||| |||| ||||| ||||| ||||| | |||||||||||| |||
Sbjct 2183980 TGCTTACCGGCGAAAATCAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATC 2183921
Query 45251 TT 45252
||
Sbjct 2183920 TT 2183919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075060365609
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |