Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 2e-12 >seq6 Length=3777980 Score = 87.8 bits (96), Expect = 2e-12 Identities = 281/436 (64%), Gaps = 0/436 (0%) Strand=Plus/Minus Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || ||||| ||||| ||||||| || || | || || | | || || |||| || Sbjct 3775540 AACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTG 3775481 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | |||||||||| || |||| | ||||| ||||| | | | ||| || || ||| Sbjct 3775480 TTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATA 3775421 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 || || || | ||||| | || | || || | || ||||||| || || || Sbjct 3775420 CCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATA 3775361 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349 |||| || || || || ||| || || || | ||| || ||| | ||||| | Sbjct 3775360 GACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAG 3775301 Query 38350 ATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAAT 38409 || || || || ||| ||||| || | | ||||| ||||| |||||| Sbjct 3775300 ATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGG 3775241 Query 38410 GGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA 38469 |||||||||||||| | | || || || || || |||| | || | |||| ||| Sbjct 3775240 GGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAG 3775181 Query 38470 TTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATT 38529 || || || || || | | || | ||||||| ||||| | ||| || | ||| Sbjct 3775180 TTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATG 3775121 Query 38530 AGCATATGTTGTGGTC 38545 | ||| ||||| |||| Sbjct 3775120 ATCATCTGTTGGGGTC 3775105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524630159760