Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
seq6 149 8e-31
seq4 87.8 2e-12
>seq2
Length=3052417
Score = 150 bits (166), Expect = 2e-31
Identities = 381/574 (66%), Gaps = 8/574 (1%)
Strand=Plus/Plus
Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231
||| ||||||||||||| || | |||||||| || ||||| || ||||| || ||
Sbjct 506897 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACC 506956
Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291
||||| || ||||| || ||||| || || || || || ||||| || || || || ||
Sbjct 506957 TCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGC 507016
Query 36292 CGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CACT--GTCATGTATCCACTTTTGAGC 36348
||||||||||| |||| ||||||| | || | || ||| |||||||| | ||
Sbjct 507017 GGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGAGGGC 507076
Query 36349 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 36408
||| |||||||| || || | || || || ||||| || || || || || ||| ||
Sbjct 507077 CCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCG 507136
Query 36409 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 36468
|| || || || | ||||| || |||| || || | || || || |||||
Sbjct 507137 CTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTT 507196
Query 36469 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 36528
|| || || || || |||||||| || | ||||||| ||| || || |
Sbjct 507197 CTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACCTCGCCGGA 507256
Query 36529 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 36588
||||| || | | || || || || || ||||| ||| ||||| || || | ||
Sbjct 507257 GAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATGCGAGAAC 507316
Query 36589 ATGTTTTATAAAATA---TTTTTCGTT-TGGTGTTAGTTTATTCCAATCATTGATATCTT 36644
|| || || | | ||||| | | || | || | ||| ||| || || |
Sbjct 507317 GTGGGAGATGAAGAACCGCTCATCGTTGTTGAGTCTG-TTCTCCCAGTCACCCATGTCCT 507375
Query 36645 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 36704
| | ||| | || || ||||||| || || ||||| ||||| || ||||| | ||
Sbjct 507376 TTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCC 507435
Query 36705 AGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
|||| || || || || || || || | |||||
Sbjct 507436 AGATTTCGTGGTACTGGATGGGGAAGAGCACAAA 507469
>seq6
Length=3777980
Score = 149 bits (164), Expect = 8e-31
Identities = 454/699 (65%), Gaps = 2/699 (0%)
Strand=Plus/Minus
Query 65985 AACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCAC 66044
||||| || || | || | ||| | || || || || | || ||||||| | |||
Sbjct 3775708 AACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCAT 3775649
Query 66045 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAA 66104
|| ||| | || ||||| | ||| || || || || ||||| ||||| | || |
Sbjct 3775648 TCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGG 3775589
Query 66105 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 66164
|||| || || | || || ||||| |||||| || ||| |||| | | |||
Sbjct 3775588 TCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATA 3775529
Query 66165 TCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 66224
|| | ||||| || || | ||| || || | | ||||| || ||||| |||||||||
Sbjct 3775528 TCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGA 3775469
Query 66225 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 66284
|| | ||||| |||||||| ||||| || | || ||| || | ||||| ||||| ||
Sbjct 3775468 TCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTT 3775409
Query 66285 CCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATT 66344
|| || || || | || ||| ||| | || || || || || || ||||| ||
Sbjct 3775408 CCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATA 3775349
Query 66345 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 66404
|| || || || || || | || || ||| | ||||| |||||||| || ||
Sbjct 3775348 CCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATG 3775289
Query 66405 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 66464
|| ||| ||||||| | || ||||| ||||| || | | |||||| ||
Sbjct 3775288 GAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCG 3775229
Query 66465 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTC 66523
|| | | || || |||||||| || || | || | ||| | ||| ||||| |||||
Sbjct 3775228 TTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAG-TTGTAGGTCTC 3775170
Query 66524 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 66583
||| || | | || | || || || || | ||| ||||| | ||| || ||
Sbjct 3775169 AATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTG 3775110
Query 66584 AGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 66643
|||| || | | ||| | | || || ||| | | |||| || || ||
Sbjct 3775109 GGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGGGTCTTGAA 3775050
Query 66644 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682
||||| |||||||| | |||||||| ||||| | |||
Sbjct 3775049 GCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAAT 3775011
>seq4
Length=3654803
Score = 87.8 bits (96), Expect = 2e-12
Identities = 458/713 (64%), Gaps = 30/713 (4%)
Strand=Plus/Plus
Query 65979 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA-CATTCATCCGGACACATCAA 66037
|| ||||| || ||||||||||||| | ||| || || | || | ||||| | |
Sbjct 397955 CGGTCGAATTCCTCTCCCCAAACATCGGCCAGACCTGGGGCCTTTCTG-GGACAGAAAAG 398013
Query 66038 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 66097
||||||| | || ||| || ||| |||||| || ||||| | ||| | ||
Sbjct 398014 AGACCACTTTTCGCCATTCTCGACTTTGCGCATAAACAGGTCAGGCACCCATAAGGCGTA 398073
Query 66098 AAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAA 66154
|| | || | || || || ||||||| || || ||||| |||| |||||
Sbjct 398074 GAAGAGGTCACGGGCTCGATTTTCCTCGGCACC---ATGGTTTTTGCGCAGATTCAGGAA 398130
Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214
||| ||| || |||||| || ||||| || | || | |||| || ||||||||
Sbjct 398131 ATCCAAAATGTCTGCATGCCAGGGCTCCAAATACACTGCAAACGCTCCTGGACGTTTGTT 398190
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
|||||| || || | ||| | ||| ||||| || | ||||| | ||| |||| || ||
Sbjct 398191 TCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAACACTCTGAGCATAGGAACGATTCC 398250
Query 66275 ATTGGATGTACCATTGGTCCCGGAGAT-ATAGCTTCCACTTGCACGAATATTACTAAT-T 66332
|||| | || | | ||| | || | ||| ||| | || | ||| || || |
Sbjct 398251 GGAGGATCTTCCTTGAGACCCAGTAATGAGAGC-TCCCTTGGCTCTAATGTTGTGGATAT 398309
Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCATA 66391
| || || || || || || |||| |||||| || || |||||| | ||| || ||
Sbjct 398310 GCAAG-CCGATACCTCCGGCGGTTTTGGAGATTTGGGCACA-CGTTTTGAGCGTGTCGTA 398367
Query 66392 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 66451
|||||| || || || | |||| | || |||||| || | |||| |
Sbjct 398368 GATGCCGTCGATGGAGTCTGCTGCCATGGCCACCAGGAAACAGGACGAAAGTTGGCCCTG 398427
Query 66452 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG-TA 66510
||||| ||||| || || |||||||| || || || || ||||| || | |
Sbjct 398428 GGGGGTTCCTGCATTGAACAAAGTAGGAGACGCATGTGTGAA----TTTTCTGAGCGACA 398483
Query 66511 GA---TTGTACGTCTCAATAGC--TGAGTCTAT-ATC-CCATTGATGAATTCCTACTGCG 66563
|| | ||| || || | ||| ||| ||| |||| |||| || | ||
Sbjct 398484 GAGCCTGGTAGGTTTCGCGCACCTTGAAAATATCATCTCCATGGATG----CCCAGGGCC 398539
Query 66564 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 66623
|| ||||| ||||| || ||||||| || || | || | | | |||| |||||
Sbjct 398540 ACTCGCATCAACATATGTTGAGGTCGCTCCACCACGTTTCCGCCAACTCTCAATAAGTAT 398599
Query 66624 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 66676
|| || |||| || || || ||||| ||| ||| | | |||||| | |||
Sbjct 398600 GACTTCTCCAGGGTCTTGAATCCAAAGTAGGAGTAAGTCATGTCTCGGTAGTA 398652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172561412360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |