Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 1e-13
>seq2
Length=3052417
Score = 91.5 bits (100), Expect = 1e-13
Identities = 327/502 (65%), Gaps = 11/502 (2%)
Strand=Plus/Minus
Query 52564 AAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGT 52623
||||||| || ||||| | || |||||| |||| | |||| |||| || ||
Sbjct 507091 AAAAAGGCCGACTGGGCCCTCAAGTGGATCTCCGACGAAGAGTCCACCTTTGGAGAGCGA 507032
Query 52624 CTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTT 52683
|| | || ||||| || || || | || || || || ||| || | || ||
Sbjct 507031 CTCATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTC 506972
Query 52684 TACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCG 52742
| |||| || | || | | ||||| |||||||| || ||||||| | || || ||
Sbjct 506971 TGGCTCAAGAAGCGAGGTC-TCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCG 506913
Query 52743 CGACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATTATAATACGCGCGTTAAAGAAA 52801
||||| || ||||||| || ||||| || || | || | ||| | || | |
Sbjct 506912 AGACGAGGGTCTGCACACTGACTTTGCCTGCCTGCTTTTCT----CGCACCTTGAGAACC 506857
Query 52802 AATTGTCATATGAAAAAATTCTAGACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGT 52861
| ||| | | | || ||| | || ||||| || | ||| || | ||||
Sbjct 506856 GACCCTCAAAGAAGATTGTTGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGT 506797
Query 52862 TTTTTACGGACGCTTTACCCGTATCAT-TGTTGGGCATGAACGCGACCATGATGTGCGAG 52920
| |||| |||||| | ||| | | | || | || |||||||| | |||||||| ||
Sbjct 506796 TCCTTACTGACGCTCTGCCC-TGTGGTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAG 506738
Query 52921 TACATCGAGTTTGTTGCGGACAGACTG-TTGATGCAGCTCGGTCAGCCGAAATACTATAA 52979
|||||||||||||| || ||| | ||| | | ||| |||||| | | || |||||
Sbjct 506737 TACATCGAGTTTGTCGCTGACCGTCTGCTAGTTGC-TCTCGGTAACTCCAAGGTGTATAA 506679
Query 52980 TGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTT 53039
| |||||||| || ||| | ||||| || || | ||||| || ||||||||
Sbjct 506678 CTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGCAAGACCAACTTTTT 506619
Query 53040 CGAGAGACGTGTGGGCGAGTAC 53061
||||| || ||| ||| |||
Sbjct 506618 CGAGAAGCGAGTGTCCGACTAC 506597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063820176800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |