Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 5e-29
seq3 132 8e-27
>seq6
Length=3777980
Score = 140 bits (154), Expect = 5e-29
Identities = 194/269 (72%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| | | |||||||||||||| || ||||| ||||| ||||
Sbjct 3175056 CGCTAAGCGACACCGAAAGATTT-TGCGAGATAACATCCAGGGTATCACTAAGCCCGCTA 3174998
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || ||||| |||||||| | || | | | || || ||||
Sbjct 3174997 TCCGACGTCTTGCACGACGAGGTGGTGTCAAGCGAATTTCCGCCCAGATTTACGAGGAGA 3174938
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| ||||| ||||||| || | || || | ||||| || || || |
Sbjct 3174937 CCCGAAACGTTCTGAAGTCCTTCCTCGAGTCTGTCATTCGAGATGCCGTCACTTACACTG 3174878
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| | ||||| || | || || || |
Sbjct 3174877 AGCACGCCAAGCGAAAGACTGTCACTTCTCTTGATGTTGTCTACGCCCTCAAGCGACAGG 3174818
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | |||| ||||| || |||||
Sbjct 3174817 GCCGAACCCTTTACGGTTTCGGTGGTTAA 3174789
>seq3
Length=3339761
Score = 132 bits (146), Expect = 8e-27
Identities = 193/270 (71%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| ||||||||||||||| || || ||||| ||||| || |
Sbjct 1566814 CGCTAAGCGACACCGAAAGAT-TCTTCGAGATAACATTCAGGGTATCACTAAGCCCGCCA 1566872
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || ||||| || ||||| | || | | |||| || ||||
Sbjct 1566873 TCCGACGTCTTGCGCGACGAGGTGGTGTGAAGCGAATTTCCGCCCAGATCTACGAGGAGA 1566932
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| ||||| || | ||||| | || || || ||| || |
Sbjct 1566933 CCCGAAACGTTCTCAAGTCTTTCCTTGAGTCTGTTATTCGAGACGCCGTCACCTACACTG 1566992
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| | ||||| || | || || || |
Sbjct 1566993 AGCACGCCAAGCGAAAGACTGTCACTTCTCTTGATGTTGTCTACGCTCTCAAGCGACAGG 1567052
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | |||| ||||| || ||||||
Sbjct 1567053 GCCGAACCCTTTACGGTTTCGGTGGTTAAT 1567082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075173485097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |