Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq6 289 7e-73
>seq6
Length=3777980
Score = 289 bits (320), Expect = 7e-73
Identities = 1155/1792 (64%), Gaps = 56/1792 (3%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459
||||| ||||| | | ||||| || |||| |||| | ||| || || || ||
Sbjct 3775053 AAGACCCTGGAGCGAGCATACCTGCTGCGAGTCAACGGTGCTGTTGCCGAGCGACCCCAA 3775112
Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519
|| ||| | ||||| || || | |||||||| || | ||| || |||||
Sbjct 3775113 CAGATGATCATGCGAGTCTCTGTCGGTATCCACGGCGACAACATTGCCCGGGCCATTGAG 3775172
Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576
|| || || | || || ||| ||| ||||| ||||| | || || | |||||
Sbjct 3775173 ACCTACAAC--TATATGT-CTCAGAAGTACTTCACTCACGCTTCCCCCACTCTCTACAAC 3775229
Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636
|| ||||||| | || |||||||| || || || ||| | || ||||||||||| |||
Sbjct 3775230 GCCGGAACTCCCCAGCCTCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCC 3775289
Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696
||||| || |||| || || || || | |||||||| ||||||||| ||| |||||
Sbjct 3775290 ATCGACGGCATCTACGATACCCTCAAAACCTGTGCTCTGATTTCCAAGTCTGCCGGCGGT 3775349
Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGG 363755
|| ||| | || |||||||| | || || || | | |||||| || || ||
Sbjct 3775350 ATCGGTCTGTCTATCCACAACATCCGAGCTACTG-GCTCCTACATTGCTGGAACTAACGG 3775408
Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815
| ||| || || | || |||||||| ||||| | | |||| || || | ||||| ||
Sbjct 3775409 AACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTATAACAACACCGCCCGATACGTTGA 3775468
Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875
||||| || ||||| || || ||||| ||||| || ||||| || | |||
Sbjct 3775469 TCAGGGAGGCAACAAGCGACCTGGTGCCTTTGCAATGTACCTTGAGCCCTGGCACGACGA 3775528
Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935
||| || ||||| ||||| || || ||| ||||| || || | || || || ||
Sbjct 3775529 TATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAAGAGATTCGAGCCCGAGA 3775588
Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA--- 363992
|||||| || || ||| | | |||| || ||| |||| || || |||| ||
Sbjct 3775589 CCTGTTCCTGGCTCTGTGGATCCCCGACCTGTTCATGGAGCGAGTCGA-GCAG--AACGC 3775645
Query 363993 -GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACG 364051
||| ||| | || | ||||| |||| || || |||||| ||| || | ||||| |
Sbjct 3775646 TGAA-TGGACCCTGATGTGCCCCAACGAGTGCCCCGGTCTTGACGACGTCTATGGTGATG 3775704
Query 364052 ACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-AAAGGCTCGTAAGACAATTCCC 364110
| | | || ||||| |||| || |||||| |||| || || || ||
Sbjct 3775705 AGTTTAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGC-CGACGAACCATCCCT 3775763
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| |||||||| |||| ||| | || | |||| ||| | || | |||| |||
Sbjct 3775764 GCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGTCCGGCAACCCCTTCATG 3775823
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
||||||| || || |||||||| |||||||||||| || |||| || |||||| ||
Sbjct 3775824 CTGTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACCTCGGAACAATTAAGTCT 3775883
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290
||||| || |||||| | || ||| | |||| || ||| || || || |||
Sbjct 3775884 TCTAACCTGTGCTGTGAGATTGTAGAGTACTCTTCTCCTGATGAGGTCGCTGTCTGCAAC 3775943
Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC-------TTTT--GAC 364338
|| || || ||||| || || | ||||| | ||| | || || | |||
Sbjct 3775944 CTGGCTTCCATCGCTCTGCCCACTTTTGTTACTCGAGACGACACCAACTCGTTCTACGAC 3776003
Query 364339 CACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
| || | || | ||| | || | |||| | | | || ||| || | ||||
Sbjct 3776004 TTCAAGAAGCTGCACGACATTGCCAAGGTCATTGTGC--GAAACCTCAACGCTATCATCG 3776061
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456
|| || || || || | || || ||| || ||||| ||||| || || || ||||
Sbjct 3776062 ACCGAAACTACTACCCGGTCCCCGAGGCCAAGAAGTCTAACATGCGACACCGACCCATTG 3776121
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC-AAGA-TGGCATTTGATTC 364514
||| ||||| ||||| || || ||| || ||| |||| | || | ||||||| ||
Sbjct 3776122 CTCTGGGTGTCCAGGGTCTGGCCGACACCTTCATG--GCTCTACGACTCCCATTTGAGTC 3776179
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
|| || || || | ||||||| || || || || | || |
Sbjct 3776180 CGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGAGCTGTCGA 3776239
Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634
|| || | || |||| | || ||| || | |||| ||||||
Sbjct 3776240 AGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAGACCTTCCAGGGCTCCCCTGC 3776299
Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694
|| |||| | ||||||| ||||| ||||| || || || || | | ||| | ||
Sbjct 3776300 CTCCAAGGGTGACCTCCAGTTCGATCTCTGGAACGTGACTCCTTCCGAGCTGTGGGAGTG 3776359
Query 364695 GGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCC 364754
||| || |||| | | |||| ||||| || ||||| || | || ||
Sbjct 3776360 GGACGATCTCAAGGCCAAGATCATGAAGACTGGTATGCGAAACTCGCTGTTGGTCGCTCC 3776419
Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814
||||||||| || || ||| | ||||| || || ||| ||||||||||| || | ||
Sbjct 3776420 CATGCCCACTGCCTCCACTTCCCAGATTCTTGGTTTCAATGAGTGCTTCGAGCCCTACAC 3776479
Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874
||| |||| || || || |||||| | || ||||| | | | || || | ||
Sbjct 3776480 TTCCAACATTTACTCTCGACGAGTTCTTGCTGGTGAATTCCAGATTGTCAACCCCTGGCT 3776539
Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934
||||||| || || || |||||| || | |||||||||| || | ||
Sbjct 3776540 GCTCAAGGACCTGGTTGAGGTTGGCCTGTGGAACGAGACCATGAAGAACCGAATTGTTGC 3776599
Query 364935 CGCTAATGGTTCTGTGCAGAACAT-TCCAGGATT-TCCAGAAGATCTGAAGCCTATTTAC 364992
| || || || ||||||||||| ||| ||| |||| | ||| ||| | |||
Sbjct 3776600 TGACAACGGATCCGTGCAGAACATCCCCAACATTCCCCAGGAAATC--AAGGACCTGTAC 3776657
Query 364993 AAAACCGTATGGGAAATTTC---CATGCGAACTCTCATTGATATGGC----GGCCGATCG 365045
|| ||||| ||||| ||||| | ||||| ||||||| ||||| | ||||||
Sbjct 3776658 AAGACCGTGTGGGAGATTTCTCAGAAGCGAA---TCATTGAGATGGCCGCTGACCGATCC 3776714
Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGC 365105
| | | || | | ||| ||||| | ||| | ||| | | || ||| |
Sbjct 3776715 CCCTTCATTGACCAGTC----TCAGTCCCTCAACATTCACATCAAGGACCCTACCATGGG 3776770
Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157
|||||| || |||||||| |||||||| ||||| ||||| |||||||||
Sbjct 3776771 CAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACAGGT 3776822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353115722678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |