Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6 111 1e-19 >seq6 Length=3777980 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | ||| || | ||| || ||||||||||| || ||||||||||| | Sbjct 1363901 CCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1363842 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | ||||||| | || || || || | ||||| ||||| |||||| || Sbjct 1363841 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1363782 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | ||| || | | | | |||||| | |||| Sbjct 1363781 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1363722 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTT 16937 || | |||||| || || ||||| || || ||||||||||||||||||| Sbjct 1363721 TCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1363673 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| || | ||| || ||||||||||| || ||||||||||||| Sbjct 1245210 CCTCCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1245151 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || || | ||||| ||||| |||||| || Sbjct 1245150 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 1245091 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | ||| || | | | | ||||| || |||| Sbjct 1245090 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACC 1245031 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCA 16934 || | |||||| || || || || || || |||||||| || |||| Sbjct 1245030 TCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1244985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087856826710