Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 6e-38
>seq2
Length=3052417
Score = 172 bits (190), Expect = 6e-38
Identities = 413/621 (67%), Gaps = 9/621 (1%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| |||||||| || || | ||| |||||||| || || | ||| ||| ||| || |
Sbjct 506882 GCAGGCAAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAG 506941
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | || ||||| ||||||||||| || || || || ||| || || || ||
Sbjct 506942 GCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAA 507001
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT-TAC--T 93267
|| || || ||||| ||||| || | | || || |||| | ||| | | |
Sbjct 507002 GATGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAA---GGTGGACTCTTCGTC 507058
Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
| |||||| || | ||||| ||||| |||||||| || || || | || ||||| ||
Sbjct 507059 GGAGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGC 507118
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
||| || ||||| |||||| | | || |||||||| ||||| | ||| || ||
Sbjct 507119 GTTGAACAGGTAGGTTCGCTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTA 507178
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
| || || |||| |||||||| || ||||| |||||||| || | || || |
Sbjct 507179 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 507238
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
| |||||| || || |||| ||| || || || || || || ||||| ||||| ||
Sbjct 507239 GGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGC 507298
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATC 93564
||||| || || | | || || || |||||| | || || || ||
Sbjct 507299 AGCAAAGAATGCGAGAACGTGGGAGATGAAGAACCGCTCATCGTTGTTGAGTCTGTTCTC 507358
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| || | || ||| |||||| | || || | ||||| || || || || ||
Sbjct 507359 CCAGTCACCCATGTCCTTTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGC 507418
Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGG 93684
|| |||||||| | ||| || || || || || || || || | ||||| || | |
Sbjct 507419 CTTCTTGTACATCTGCCAGATTTCGTGGTACTGGATGGGGAAGAGCACAAACCGTCGATG 507478
Query 93685 GTTATCTTTTAGTAACGGCTC 93705
||| || || || | |||||
Sbjct 507479 GTTCTCCTTGAGCAGAGGCTC 507499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860598137960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |