Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq6 87.8 2e-12
seq5 86.0 5e-12
>seq6
Length=3777980
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| || || |||| || || | ||| | || || || || || |||||||| ||
Sbjct 1363902 ACCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1363843
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || || || || || ||||| ||| |||| || ||||| |||||||| ||
Sbjct 1363842 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 1363783
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| || || ||||| ||||| || | | || | |||||||| || || ||
Sbjct 1363782 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1363723
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || ||||| || || || ||||||||||||||
Sbjct 1363722 CTCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1363675
>seq5
Length=4047401
Score = 86.0 bits (94), Expect = 5e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || |||| | ||| | ||| | || || || || ||||||||||| ||
Sbjct 2184064 ATACCACCTCGGAGTCGGAGAACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAGTCA 2184005
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || ||||| ||| | || || ||||| |||||||||
Sbjct 2184004 GACAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAGTCGCTGCTGGTCCGGA 2183945
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| |||||| || | | || | |||||||| ||| |||
Sbjct 2183944 GGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCG 2183885
Query 114333 AC 114334
||
Sbjct 2183884 AC 2183883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134251508748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |