Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 8e-21
seq2 86.0 1e-11
>seq5
Length=4047401
Score = 116 bits (128), Expect = 8e-21
Identities = 130/174 (75%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || || | ||||||||| |||| || |||||||| || || ||||| || ||
Sbjct 1593193 GGGGAAACCCTCGACCTGACCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCACC 1593134
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || ||||| |||||||| || || ||||| || | | | || ||||||
Sbjct 1593133 GTTAGGACCACAGAGACCGTATCGTCGGCCTCGCTTGAGTCGCAGCTGGGTTCGGTTCAG 1593074
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||| || |||| || |||||||| || ||||| | |||||||||||| ||
Sbjct 1593073 CAGAATCTTAGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCGCC 1593020
>seq2
Length=3052417
Score = 86.0 bits (94), Expect = 1e-11
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 243511 GAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGC 243570
|| || |||| | ||| |||| ||| || |||||| | || || | || ||||
Sbjct 506821 GAGGCTGTTGGCATCGAGCAGGAGTTCCTTACTGACGCTCTGCCCTGTGGTCTGCTTGGT 506762
Query 243571 ATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCG 243630
|||||| | | || ||| | ||||||||||| || || || ||||| | | | ||
Sbjct 506761 ATGAACGCCAAGCTGATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTGCTAGTTGCT 506702
Query 243631 CTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCG 243690
|| ||| | || ||||| ||||||| |||||||| | ||| |||||| ||| ||
Sbjct 506701 CTCGGTAACTCCAAGGTGTATAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCT 506642
Query 243691 CTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
|| || || || ||||| ||||| ||||| ||
Sbjct 506641 CTGGCCGGCAAGACCAACTTTTTCGAGAAGCGAGT 506607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879590211150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |