Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 152 6e-32 >seq2 Length=3052417 Score = 152 bits (168), Expect = 6e-32 Identities = 348/518 (67%), Gaps = 12/518 (2%) Strand=Plus/Plus Query 125768 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 125827 || ||||||||||| ||||| ||||| ||| ||| ||| |||||||| || || || Sbjct 506607 ACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 506666 Query 125828 GGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGA 125885 ||||| | ||||| | | ||| | ||| | | | || ||||| || | || Sbjct 506667 GGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACT--AGCAGACGGTCAGCGA 506724 Query 125886 CGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCG 125945 | |||| ||||||| ||||| || | ||||||||| | || ||| || || | Sbjct 506725 CAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAG 506784 Query 125946 CGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATGGTGT 126005 |||| | |||| ||| ||| || | || || || | || | | | || | | Sbjct 506785 CGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCAACAATCT 506844 Query 126006 CCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCTTGGTGGAGA 126064 | |||| || | ||| || | ||| || |||||| || ||| ||| Sbjct 506845 TCTTTGAGGGTCGGTT-CTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGTCAGTGTGCAGA 506903 Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| ||||||||||| || || |||||| || || ||||||||||| |||||| Sbjct 506904 CCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTC 506963 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || || || ||||||||||| ||||| || || || Sbjct 506964 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAG 507023 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCATCGCCCAC 126241 |||| ||| ||||| |||||| | |||| | ||| | |||||| | ||||| Sbjct 507024 GCAATGAGTCGCTCTCCAAAGGTG---GACTCTTCGTCGGAGATCCACTTGAGGGCCCAG 507080 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | |||||||||| ||| || |||| ||||| ||| || Sbjct 507081 TCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGC 507118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353383459320