Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 5e-13
seq6 86.0 6e-12
>seq5
Length=4047401
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || || || ||||| | || || || || ||||||||||| || |
Sbjct 2184062 ACCACCTCGGAGTCGGAGAACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGA 2184003
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || || |||||||| ||||| |||| || ||||||||||| |||||
Sbjct 2184002 CAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAGTCGCTGCTGGTCCGGAGG 2183943
Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359
|||||| || || || || || ||
Sbjct 2183942 AATTCCCTCCTTGTCCTGAATCTT 2183919
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| || |||||||| || ||| |||| || ||||||||||| || |||||||| || ||
Sbjct 2184217 TCCTCGAGCTGCTTACCAGCAAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 2184158
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|| || || || ||| ||| || | || ||| | || || || | ||| | |
Sbjct 2184157 TCCTGAATCTTGGACTTGACATTATCAATAGTGTCAGAAGACTCAACCTCGAGAGTGATG 2184098
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || |||| ||| || |||||||| |||||
Sbjct 2184097 GTCTTTCCAGTCAGAGTCTTGACGAAAATCTGCAT 2184063
>seq6
Length=3777980
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || || || ||||| | || || || || || |||||||| || |
Sbjct 1363902 ACCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1363843
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || |||| || |||||||| ||||| | || || ||||||||||| || ||
Sbjct 1363842 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 1363783
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || || || || || ||| || || | || || | |||||
Sbjct 1363782 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1363723
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445
|| | || | ||||| ||||| | || || || ||||| |||||||
Sbjct 1363722 CTCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1363673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644618878760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |