Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq6 315 7e-81
seq4 134 1e-26
>seq6
Length=3777980
Score = 315 bits (348), Expect = 7e-81
Identities = 1087/1666 (65%), Gaps = 46/1666 (3%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776
||| | ||||||| |||||| || |||||| | ||||| || | || | | ||
Sbjct 3775035 TACAACTACTTTGGCTTCAAGACCCTGGAGCGAGCATACCTGCTGCGAG-TCAACGGTGC 3775093
Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836
||| |||||||||| || ||| || | ||||| ||| | |||| || |||||| || |
Sbjct 3775094 TGTTGCCGAGCGACCCCAACAGATGATCATGCGAGTCTCTGTCGGTATCCACGGCGACAA 3775153
Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895
||| ||| ||| | || || | ||| | ||| | || ||
Sbjct 3775154 CATTGCCCGGGCCATTGAGACCTA-CAACTATATGTCTCAGAAGTACTTCACTCACGCTT 3775212
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || || | |||||| || || || ||| |||||||| ||||||||||| | |
Sbjct 3775213 CCCCCACTCTCTACAACGCCGGAACTCCCCAGCCTCAGATGTCGTCGTGTTTCCTTGTCA 3775272
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| |||| |||||||||| ||| || | ||| | |||||| |||||| || |
Sbjct 3775273 ACATGAAGGACGACTCCATCGACGGCATCTACGATACCCTCAAAACCTGTGCTCTGATTT 3775332
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| || | || || || ||||| | | ||||| || | || || | || |||||||
Sbjct 3775333 CCAAGTCTGCCGGCGGTATCGGTCTGTCTATCCACAACATCCGAGCTACTGGCTCCTACA 3775392
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
| || || || || ||||||||||| |||| || ||||| || |||| ||||||
Sbjct 3775393 TTGCTGGAACTAACGGAACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTATAACAACA 3775452
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || ||||| || ||||| || | | | ||| | || || | || || |
Sbjct 3775453 CCGCCCGATACGTTGATCAGGGAGGCAACAAGCGACCTGGTGCCTTTGCAATGTACCTTG 3775512
Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255
|||||||||||| || | | ||| ||| ||||||||||||||||| || ||
Sbjct 3775513 AGCCCTGGCACGACGATATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGA-- 3775570
Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
|||| | ||| ||||||| ||| ||||| ||| | || ||||| || ||| | |
Sbjct 3775571 -AGAGATTCGAGCCCGAGACCTGTTCCTGGCTCTGTGGATCCCCGACCTGTTCATGGAGC 3775629
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| |||||| | ||| | | |||| || | || ||||| || || ||||| || ||
Sbjct 3775630 GAGTCGAGCAGAACGCTGAATGGACCCTGATGTGCCCCAACGAGTGCCCCGGTCTTGACG 3775689
Query 94373 ACGTTTGTG--GATCGCGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGG-CAAG 94428
|||| | || ||| | |||| ||| | |||| | | ||||| | |||| | ||
Sbjct 3775690 ACGTCTATGGTGAT-GAGTTT--AAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAG 3775746
Query 94429 GCC-AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
||| | ||| || ||| |||||||||| | || || | ||| ||| ||
Sbjct 3775747 GCCGACGAA--CCATCCCTGCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGA 3775804
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
| | || | |||| ||| ||| ||||||||| |||| |||||||||||| || |
Sbjct 3775805 GTCCGGCAACCCCTTCATGCTGTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAA 3775864
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
|||||| || ||| || || |||||| |||||||| ||||| ||||||| ||
Sbjct 3775865 CCTCGGAACAATTAAGTCTTCTAACCTGTGCTGTGAGATTGTAGAGTACTCTTCTCCTGA 3775924
Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATGC 94664
||| | ||||| || ||||||| |||||| ||| ||||||| || |||||
Sbjct 3775925 TGAGGTCGCTGTCTGCAACCTGGCTTCCATCGCTCTGCCCACTTTTGTTACTCGAGA--- 3775981
Query 94665 CTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATG 94722
| |||| | ||| ||| | ||| | || |||| || | || |||| ||
Sbjct 3775982 CGACAC--CAACTCGTTC-TACGACTTCAAGAAGCTGCACGACATTGC--CAAGGTCATT 3776036
Query 94723 GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782
|| ||||| ||| | |||||| |||| |||||| ||||| ||||| ||||
Sbjct 3776037 GTGCGAAACCTCAACGCTATCATCGACCGAAACTACTACCCGGTCCCCGAGGCCAAGAAG 3776096
Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842
|| ||| || || || ||||| | | || ||||||||| | || ||| | | ||
Sbjct 3776097 TCTAACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCCGACACCTTCATG 3776156
Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902
| || || || | || || | || || | | || | | || |||||
Sbjct 3776157 GCTCTACGACTCCCATTTGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAG 3776216
Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA 94962
| ||| || |||| || | || || | | |||| |||||| | |
Sbjct 3776217 ACCATCTACCACGGAGCTGTCGAAGCCTCTTACGAGATGGCTCTTGAGGACGGTG---CC 3776273
Query 94963 CACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGGGG 95021
|||| | |||| || || |||| | |||| | |||||||| ||||||
Sbjct 3776274 TACGAGACCTTCCAGGGCTC-CCCTGCCTCCAAGGGTGACCTCCAGTTCGATCTCTGGAA 3776332
Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGG 95081
|||| || || | |||| || ||||| | ||| || | | || || ||
Sbjct 3776333 CGTGACTCCTTCCGAGCTGTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGACTGG 3776392
Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141
| || |||| ||||| | || || ||||||||||| |||||||| | ||||| |||||
Sbjct 3776393 TATGCGAAACTCGCTGTTGGTCGCTCCCATGCCCACTGCCTCCACTTCCCAGATTCTTGG 3776452
Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201
||| |||| ||||| |||| ||| |||||| | ||| | || || || || ||
Sbjct 3776453 TTTCAATGAGTGCTTCGAGCCCTACACTTCCAACATTTACTCTCGACGAGTTCTTGCTGG 3776512
Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTG---TGTG 95258
||||||| | ||||| || || ||||||| || | || || ||||
Sbjct 3776513 TGAATTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTG--GT-TGAGGTTGGCCTGTG 3776569
Query 95259 GGGTGACAAGGTCAAGAACC-AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317
| || | | ||||||| || || | | | |||||| ||||| |||||||||||
Sbjct 3776570 GAACGAGACCATGAAGAACCGAATTGTTGC-TGACAACGGATCCGTGCAGAACATCCCCA 3776628
Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363
| || || |||| ||||||| || ||||||||||||||||||||
Sbjct 3776629 ACATTCCCCAGGAAATCAAGGACCTGTACAAGACCGTGTGGGAGAT 3776674
>seq4
Length=3654803
Score = 134 bits (148), Expect = 1e-26
Identities = 482/741 (65%), Gaps = 22/741 (3%)
Strand=Plus/Minus
Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964
||||||| || || ||||| | || | || || ||||||||| || | | |
Sbjct 398447 TGTTCAATGCAGGAACCCCCCAGGGCCAACTTTCGTCCTGTTTCCTGGTGGCCATGGCAG 398388
Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024
| ||||||||| ||| || | ||||| ||||| ||||| ||||| ||| ||
Sbjct 398387 CAGACTCCATCGACGGCATCTACGACACGCTCAAAACGTGTGCCCAAATCTCCAAAACCG 398328
Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC-CGCGGT 94083
| || || ||||| | | ||||| || | | |||| ||| | ||| | |||
Sbjct 398327 CCGGAGGTATCGGCTTGCATATCCACAACATTAGAGCCAAGGGAGCTCTCATTACTGGGT 398268
Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143
||| || | ||| ||| |||| ||||||||| | || ||||||||| | || ||
Sbjct 398267 CTCAA-GGAAGATCCTCCGGAATCGTTCCTATGCTCAGAGTGTTCAACAACACTGCTCGG 398209
Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203
||||||||||| || || | | || | || || || ||| | |||||||||
Sbjct 398208 TACGTGGACCAAGGAGGAAACAAACGTCCAGGAGCGTTTGCAGTGTATTTGGAGCCCTGG 398149
Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA-- 94261
|| || ||| | || |||| | | ||||| || ||||| || ||| ||| |
Sbjct 398148 CATGCAGACATTTTGGATTTCCTGAATCTGCGCAAAAACCATGGTGCCGA---GGAAAAT 398092
Query 94262 -GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG---AAACGCGTC 94317
| ||| | |||||||||||||| | |||||||| ||||| |||||| ||| |||
Sbjct 398091 CGAGCCCGTGACCTCTTCTACGCCTTATGGGTGCCTGACCTGTTTATGCGCAAA---GTC 398035
Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC--GGACTGTCCGACG 94375
||||| | ||| |||||| ||||||| ||| | ||| || ||| |||| |
Sbjct 398034 GAGAATGGCGAAAAGTGGTCTCTTTTCTGTCCCA--GAAAGGCCCCAGGTCTGGCCGATG 397977
Query 94376 TTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGA 94435
|||| ||| | || || | ||| | |||||| || |||| ||
Sbjct 397976 TTTGGGGAGAGGAATTCGACCGCAAGTACGAGGATTACGAGTCTAAGGGACTTTACAACT 397917
Query 94436 AGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACG-TACAGGTGGAGACGGGT 94494
| || || || | |||||| | || | |||| || | || || ||
Sbjct 397916 CGCAGATTGACGCCCAGGAGCTGTTCAAGGCCATTCT-GACGAGCCAAATTGAAACAGGA 397858
Query 94495 ACGCCCTACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
|| | ||| ||| || ||| |||| ||||| || ||||||||| || |||||||
Sbjct 397857 GGACCTTTCATGCTGTATAAAGACAGCTGT-AACGCGAAATCCAACCAGAAGAACCTCGG 397799
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||||| || ||| |||| |||||||||||| |||| | ||||| |||||| |
Sbjct 397798 CACAATCAAATCGTCCAATTTGTGTACCGAGATTGTCCAGTACTCGTCTCCTGACGAGGT 397739
Query 94614 TGCTGTGTGTAACCTGGGCTC 94634
|||||| || || |||| |||
Sbjct 397738 TGCTGTTTGCAATCTGGCCTC 397718
Score = 107 bits (118), Expect = 2e-18
Identities = 199/292 (68%), Gaps = 0/292 (0%)
Strand=Plus/Minus
Query 95073 CAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCA 95132
|||||||||| || |||| | || ||||| ||||||||||| || || ||||| ||||
Sbjct 397285 CAAACACGGTATGCGAAACTCTCTACTTGTTGCCCCCATGCCTACAGCTTCCACATCGCA 397226
Query 95133 GATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGT 95192
||| || ||| ||||||||| |||||||| | ||| |||||| | ||| | |||||
Sbjct 397225 GATTCTGGGCCACAACGAGTGTTTCGAACCGTACACGTCCAACATTTACCTTCGTCGGGT 397166
Query 95193 GCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGG 95252
| || || || || | ||| | ||| || || | || || | |||||
Sbjct 397165 CCAGGCTGGTGAGTTTCTCGTGGTGAACCAGTGGCTGATGAAAGATCTAATCAAACTGGG 397106
Query 95253 TGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACAT 95312
||||| || || | || |||| | | | || ||||||||| |||||| |||
Sbjct 397105 CATGTGGACCGAGGAGATGAAAAACCGCATCATTCACGACAACGGCTCGATCCAGAGCAT 397046
Query 95313 CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364
| | || ||||| || ||||| || | |||| || | |||||| |||
Sbjct 397045 CACCCAGATACCCGAACACATCCGAGCCGTGTACAGAACTGCGTGGGAAATC 396994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723020662840
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